Miyakogusa Predicted Gene
- Lj0g3v0294029.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0294029.3 tr|G7JBP5|G7JBP5_MEDTR NAD(P)H-quinone
oxidoreductase subunit OS=Medicago truncatula
GN=MTR_3g107910,89.15,0,seg,NULL; no description,WD40/YVTN
repeat-like-containing domain; PUTATIVE UNCHARACTERIZED
PROTEIN,N,CUFF.19689.3
(1167 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58302 similar to UniRef100_A7P5M4 Cluster: Chromosome... 1072 0.0
gnl|LJGI|TC67845 similar to UniRef100_A7P5M4 Cluster: Chromosome... 440 e-123
gnl|LJGI|TC81806 similar to UniRef100_A7P5M4 Cluster: Chromosome... 200 1e-50
gnl|LJGI|TC76081 similar to UniRef100_A7P5M4 Cluster: Chromosome... 196 2e-49
>gnl|LJGI|TC58302 similar to UniRef100_A7P5M4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (39%)
Length = 1230
Score = 1072 bits (541), Expect = 0.0
Identities = 712/768 (92%), Gaps = 2/768 (0%)
Strand = Plus / Plus
Query: 400 ggcttcacattttcggatataaactctgtacgcgcaagcacaagtaaagttgcttgttgc 459
|||||||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||
Sbjct: 1 ggcttcacattttctgatataaattctgtacgtgcaagcacaagtaaagttgtctgttgc 60
Query: 460 catttctcatctgatgggaaattacttgcaagtggtggccatgataagaaggctgttcta 519
||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||| ||
Sbjct: 61 catttctcatctgatggcaaattgctcgcaagtggtggccatgataaaaaggctgtttta 120
Query: 520 tggtacacggattctctaaaacaaaaagctactcttgaagagcattcatccttgatcact 579
||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 121 tggtatacggattctctaaaacaaaaagctactcttgaagagcattcagctttgatcact 180
Query: 580 gatgttcgtttcagtccaagcatgccacgtctggcaacatcttcattcgacaaaactgtt 639
||||| |||||||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 181 gatgtccgtttcagccccagcatgccgcgtctggcaacatcttcatttgacaaaactgtc 240
Query: 640 agggtttgggatgttgacaatcctgggtattcacttcgcaccttcacgggacattctaca 699
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 241 agggtttgggatgttgataatcctgggtattcacttcgcacctttacgggacattctgca 300
Query: 700 tccgttatgtctctagattttcatccaaataaagacgaccttatctgctcttgtgacggt 759
|| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 301 tctgttatgtcactagattttcatccaaataaagaggaccttatctgctcttgtgatagt 360
Query: 760 gatggtgagatacgatattggagcataaacaatggcagttgtgctagagtctcaaagggt 819
|||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 361 gatggtgaaatacgatattggagcataaacaatggcagttgttctagagtctccaagggt 420
Query: 820 ggcactacccagatgagatttcaacctcgtctagggaggtttcttgctgcagctgcagag 879
||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||| |
Sbjct: 421 ggcactaccaagatgagatttcaacctcggctagggaggtatcttgctgcagctgcaggg 480
Query: 880 aacatcgtgtctatacttgatgtggagacacaggcatgccgatattcattaaagggacac 939
||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 481 aacatcgtgtctatactggacgtggagactcaggcatgccgatattcattaaagggacac 540
Query: 940 acaaagaccatcgattctgtatgttgggatccatctggggagttgctggcgtctgtgagt 999
|||||||| || |||||||||||||||||||||||||| ||||| || || ||||||||
Sbjct: 541 acaaagacaatagattctgtatgttgggatccatctggagagttactagcatctgtgagc 600
Query: 1000 gaggactccgtcagggtctggaacctcggaacagggagtgatggggaatgtgttcatgag 1059
|||||||| ||||||||||||||||| |||||||||| |||||||||| ||||||||||
Sbjct: 601 gaggactctgtcagggtctggaaccttggaacagggactgatggggaa--tgttcatgag 658
Query: 1060 cttagctgtaacggcagcaaatttcactcgtgtgttttccacccaacttacccttcatta 1119
|||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 659 tttagctgtaatggcagtaaatttcactcgtgtgttttccacccaacgtacccttcatta 718
Query: 1120 ctagtcattggctgttaccagtcaatggagctgtggaacattgctgag 1167
|| ||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 719 ctggtcattggctgttaccagtcattggagctgtggaacatggctgag 766
>gnl|LJGI|TC67845 similar to UniRef100_A7P5M4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (14%)
Length = 571
Score = 440 bits (222), Expect = e-123
Identities = 222/222 (100%)
Strand = Plus / Plus
Query: 946 accatcgattctgtatgttgggatccatctggggagttgctggcgtctgtgagtgaggac 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accatcgattctgtatgttgggatccatctggggagttgctggcgtctgtgagtgaggac 60
Query: 1006 tccgtcagggtctggaacctcggaacagggagtgatggggaatgtgttcatgagcttagc 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccgtcagggtctggaacctcggaacagggagtgatggggaatgtgttcatgagcttagc 120
Query: 1066 tgtaacggcagcaaatttcactcgtgtgttttccacccaacttacccttcattactagtc 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtaacggcagcaaatttcactcgtgtgttttccacccaacttacccttcattactagtc 180
Query: 1126 attggctgttaccagtcaatggagctgtggaacattgctgag 1167
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attggctgttaccagtcaatggagctgtggaacattgctgag 222
>gnl|LJGI|TC81806 similar to UniRef100_A7P5M4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 1032
Score = 200 bits (101), Expect = 1e-50
Identities = 210/245 (85%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 atgatcaggtttcaaaaaaccagatgggggagaaagagaaagcagcctgtatcttcttca 60
||||||||||| | |||||||||| || ||||||||||| ||||| |||||||| ||
Sbjct: 708 atgatcaggttaccaaaaaccagactggt-agaaagagaaaacagcccgtatcttcctct 766
Query: 61 ggtcctgccaatagttctggaaccgcgaatacgacaggcccatctccaagttcagctccc 120
|||||||||||||| || ||||| || |||||| |||||||||||||||||||||| |||
Sbjct: 767 ggtcctgccaatagctcaggaacagcaaatacggcaggcccatctccaagttcagcaccc 826
Query: 121 tcaactccctcaacccatacgcctggagatgtgatatcaatgcctgccatgccccataat 180
||||| |||||||| ||||| |||| |||||||| ||||||||||| | || ||||||
Sbjct: 827 tcaacgccctcaacgcatacagctggtgatgtgatgtcaatgcctgctctacctcataat 886
Query: 181 ggtagttcctcaaagcctctaatgatgtttggcactgaaagcactggaacacttacatca 240
||||| || |||||||| ||||||||||||||||||| |||| ||||| ||||| |||
Sbjct: 887 ggtagctcatcaaagccattaatgatgtttggcactgatggcaccggaactcttacctca 946
Query: 241 ccttc 245
|||||
Sbjct: 947 ccttc 951
Score = 56.0 bits (28), Expect = 5e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 282 ggctgatgtggatcgctttgtggaggatggactactagatgaaaacgtggagtctttttt 341
|||||||||||| || ||||| ||||||||| || ||||| || ||||||||||||||
Sbjct: 961 ggctgatgtggaccgttttgttgaggatggatctcttgatgacaatgtggagtctttttt 1020
Query: 342 acgccatgatga 353
| |||||||||
Sbjct: 1021 atcccatgatga 1032
>gnl|LJGI|TC76081 similar to UniRef100_A7P5M4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (17%)
Length = 936
Score = 196 bits (99), Expect = 2e-49
Identities = 214/251 (85%), Gaps = 1/251 (0%)
Strand = Plus / Plus
Query: 898 gatgtggagacacaggcatgccgatattcattaaagggacacacaaagaccatcgattct 957
||||| |||||||| ||||||||||||||| ||||||| || ||||| | || |||||
Sbjct: 2 gatgtagagacacaagcatgccgatattcactaaagggtcatacaaactctatacattct 61
Query: 958 gtatgttgggatccatctggggagttgctggcgtctgtgagtgaggactccgtcagggtc 1017
| |||||||||| ||||||||||| ||||| ||||| ||||| ||||| |||||||||
Sbjct: 62 gcgtgttgggatct-tctggggagtttctggcatctgtcagtgaagactctgtcagggtc 120
Query: 1018 tggaacctcggaacagggagtgatggggaatgtgttcatgagcttagctgtaacggcagc 1077
||| || ||||||||| |||| |||||||| |||||||||||||||||||| ||||
Sbjct: 121 cggactcttggaacagggggtgaaggggaatgcgttcatgagcttagctgtaatggcaat 180
Query: 1078 aaatttcactcgtgtgttttccacccaacttacccttcattactagtcattggctgttac 1137
||||||||||| ||||||||||||||||| || |||||| | || |||||||| ||||||
Sbjct: 181 aaatttcactcatgtgttttccacccaacgtatccttcaatgctggtcattggttgttac 240
Query: 1138 cagtcaatgga 1148
|||||| ||||
Sbjct: 241 cagtcattgga 251