Miyakogusa Predicted Gene
- Lj0g3v0294029.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0294029.1 Non Chatacterized Hit- tr|I1JUH3|I1JUH3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48915
PE,91.25,0,seg,NULL; no description,WD40/YVTN repeat-like-containing
domain; PUTATIVE UNCHARACTERIZED PROTEIN,N,CUFF.19689.1
(1140 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58302 similar to UniRef100_A7P5M4 Cluster: Chromosome... 1072 0.0
gnl|LJGI|TC67845 similar to UniRef100_A7P5M4 Cluster: Chromosome... 440 e-123
gnl|LJGI|TC81806 similar to UniRef100_A7P5M4 Cluster: Chromosome... 250 2e-65
gnl|LJGI|TC76081 similar to UniRef100_A7P5M4 Cluster: Chromosome... 196 2e-49
>gnl|LJGI|TC58302 similar to UniRef100_A7P5M4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (39%)
Length = 1230
Score = 1072 bits (541), Expect = 0.0
Identities = 712/768 (92%), Gaps = 2/768 (0%)
Strand = Plus / Plus
Query: 373 ggcttcacattttcggatataaactctgtacgcgcaagcacaagtaaagttgcttgttgc 432
|||||||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||
Sbjct: 1 ggcttcacattttctgatataaattctgtacgtgcaagcacaagtaaagttgtctgttgc 60
Query: 433 catttctcatctgatgggaaattacttgcaagtggtggccatgataagaaggctgttcta 492
||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||| ||
Sbjct: 61 catttctcatctgatggcaaattgctcgcaagtggtggccatgataaaaaggctgtttta 120
Query: 493 tggtacacggattctctaaaacaaaaagctactcttgaagagcattcatccttgatcact 552
||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 121 tggtatacggattctctaaaacaaaaagctactcttgaagagcattcagctttgatcact 180
Query: 553 gatgttcgtttcagtccaagcatgccacgtctggcaacatcttcattcgacaaaactgtt 612
||||| |||||||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 181 gatgtccgtttcagccccagcatgccgcgtctggcaacatcttcatttgacaaaactgtc 240
Query: 613 agggtttgggatgttgacaatcctgggtattcacttcgcaccttcacgggacattctaca 672
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 241 agggtttgggatgttgataatcctgggtattcacttcgcacctttacgggacattctgca 300
Query: 673 tccgttatgtctctagattttcatccaaataaagacgaccttatctgctcttgtgacggt 732
|| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 301 tctgttatgtcactagattttcatccaaataaagaggaccttatctgctcttgtgatagt 360
Query: 733 gatggtgagatacgatattggagcataaacaatggcagttgtgctagagtctcaaagggt 792
|||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 361 gatggtgaaatacgatattggagcataaacaatggcagttgttctagagtctccaagggt 420
Query: 793 ggcactacccagatgagatttcaacctcgtctagggaggtttcttgctgcagctgcagag 852
||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||| |
Sbjct: 421 ggcactaccaagatgagatttcaacctcggctagggaggtatcttgctgcagctgcaggg 480
Query: 853 aacatcgtgtctatacttgatgtggagacacaggcatgccgatattcattaaagggacac 912
||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 481 aacatcgtgtctatactggacgtggagactcaggcatgccgatattcattaaagggacac 540
Query: 913 acaaagaccatcgattctgtatgttgggatccatctggggagttgctggcgtctgtgagt 972
|||||||| || |||||||||||||||||||||||||| ||||| || || ||||||||
Sbjct: 541 acaaagacaatagattctgtatgttgggatccatctggagagttactagcatctgtgagc 600
Query: 973 gaggactccgtcagggtctggaacctcggaacagggagtgatggggaatgtgttcatgag 1032
|||||||| ||||||||||||||||| |||||||||| |||||||||| ||||||||||
Sbjct: 601 gaggactctgtcagggtctggaaccttggaacagggactgatggggaa--tgttcatgag 658
Query: 1033 cttagctgtaacggcagcaaatttcactcgtgtgttttccacccaacttacccttcatta 1092
|||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 659 tttagctgtaatggcagtaaatttcactcgtgtgttttccacccaacgtacccttcatta 718
Query: 1093 ctagtcattggctgttaccagtcaatggagctgtggaacattgctgag 1140
|| ||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 719 ctggtcattggctgttaccagtcattggagctgtggaacatggctgag 766
>gnl|LJGI|TC67845 similar to UniRef100_A7P5M4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (14%)
Length = 571
Score = 440 bits (222), Expect = e-123
Identities = 222/222 (100%)
Strand = Plus / Plus
Query: 919 accatcgattctgtatgttgggatccatctggggagttgctggcgtctgtgagtgaggac 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accatcgattctgtatgttgggatccatctggggagttgctggcgtctgtgagtgaggac 60
Query: 979 tccgtcagggtctggaacctcggaacagggagtgatggggaatgtgttcatgagcttagc 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccgtcagggtctggaacctcggaacagggagtgatggggaatgtgttcatgagcttagc 120
Query: 1039 tgtaacggcagcaaatttcactcgtgtgttttccacccaacttacccttcattactagtc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtaacggcagcaaatttcactcgtgtgttttccacccaacttacccttcattactagtc 180
Query: 1099 attggctgttaccagtcaatggagctgtggaacattgctgag 1140
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attggctgttaccagtcaatggagctgtggaacattgctgag 222
>gnl|LJGI|TC81806 similar to UniRef100_A7P5M4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (32%)
Length = 1032
Score = 250 bits (126), Expect = 2e-65
Identities = 277/326 (84%), Gaps = 1/326 (0%)
Strand = Plus / Plus
Query: 1 atgatcaggtttcaaaaaaccagatgggggagaaagagaaagcagcctgtatcttcttca 60
||||||||||| | |||||||||| || ||||||||||| ||||| |||||||| ||
Sbjct: 708 atgatcaggttaccaaaaaccagactggt-agaaagagaaaacagcccgtatcttcctct 766
Query: 61 ggtcctgccaatagttctggaaccgcgaatacgacaggcccatctccaagttcagctccc 120
|||||||||||||| || ||||| || |||||| |||||||||||||||||||||| |||
Sbjct: 767 ggtcctgccaatagctcaggaacagcaaatacggcaggcccatctccaagttcagcaccc 826
Query: 121 tcaactccctcaacccatacgcctggagatgtgatatcaatgcctgccatgccccataat 180
||||| |||||||| ||||| |||| |||||||| ||||||||||| | || ||||||
Sbjct: 827 tcaacgccctcaacgcatacagctggtgatgtgatgtcaatgcctgctctacctcataat 886
Query: 181 ggtagttcctcaaagcctctaatgatgtttggcactgaaagcactggaacacttacatca 240
||||| || |||||||| ||||||||||||||||||| |||| ||||| ||||| |||
Sbjct: 887 ggtagctcatcaaagccattaatgatgtttggcactgatggcaccggaactcttacctca 946
Query: 241 ccttcaaaccagttggctgatgtggatcgctttgtggaggatggactactagatgaaaac 300
||||| || || |||||||||||||| || ||||| ||||||||| || ||||| ||
Sbjct: 947 ccttccaatcaattggctgatgtggaccgttttgttgaggatggatctcttgatgacaat 1006
Query: 301 gtggagtcttttttacgccatgatga 326
||||||||||||||| |||||||||
Sbjct: 1007 gtggagtcttttttatcccatgatga 1032
>gnl|LJGI|TC76081 similar to UniRef100_A7P5M4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (17%)
Length = 936
Score = 196 bits (99), Expect = 2e-49
Identities = 214/251 (85%), Gaps = 1/251 (0%)
Strand = Plus / Plus
Query: 871 gatgtggagacacaggcatgccgatattcattaaagggacacacaaagaccatcgattct 930
||||| |||||||| ||||||||||||||| ||||||| || ||||| | || |||||
Sbjct: 2 gatgtagagacacaagcatgccgatattcactaaagggtcatacaaactctatacattct 61
Query: 931 gtatgttgggatccatctggggagttgctggcgtctgtgagtgaggactccgtcagggtc 990
| |||||||||| ||||||||||| ||||| ||||| ||||| ||||| |||||||||
Sbjct: 62 gcgtgttgggatct-tctggggagtttctggcatctgtcagtgaagactctgtcagggtc 120
Query: 991 tggaacctcggaacagggagtgatggggaatgtgttcatgagcttagctgtaacggcagc 1050
||| || ||||||||| |||| |||||||| |||||||||||||||||||| ||||
Sbjct: 121 cggactcttggaacagggggtgaaggggaatgcgttcatgagcttagctgtaatggcaat 180
Query: 1051 aaatttcactcgtgtgttttccacccaacttacccttcattactagtcattggctgttac 1110
||||||||||| ||||||||||||||||| || |||||| | || |||||||| ||||||
Sbjct: 181 aaatttcactcatgtgttttccacccaacgtatccttcaatgctggtcattggttgttac 240
Query: 1111 cagtcaatgga 1121
|||||| ||||
Sbjct: 241 cagtcattgga 251