Miyakogusa Predicted Gene
- Lj0g3v0293229.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0293229.1 tr|G7ITZ5|G7ITZ5_MEDTR Aconitate hydratase
OS=Medicago truncatula GN=MTR_2g088360 PE=4 SV=1,75.19,0,Aconitase
iron-sulfur domain,Aconitase/3-isopropylmalate dehydratase large
subunit, alpha/beta/alpha,CUFF.19628.1
(1482 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58581 similar to UniRef100_P49608 Cluster: Aconitate ... 2422 0.0
gnl|LJGI|FS321103 similar to UniRef100_Q9FVE9 Cluster: Cytosolic... 924 0.0
gnl|LJGI|TC64400 similar to UniRef100_Q9FVE9 Cluster: Cytosolic ... 432 e-120
gnl|LJGI|AU089244 homologue to UniRef100_A7P0Q1 Cluster: Chromos... 180 2e-44
gnl|LJGI|TC82096 homologue to UniRef100_Q9SIB9 Cluster: Aconitat... 168 6e-41
gnl|LJGI|TC76350 similar to UniRef100_A7P0Q1 Cluster: Chromosome... 115 8e-25
gnl|LJGI|TC78634 similar to UniRef100_A7P0Q1 Cluster: Chromosome... 111 1e-23
gnl|LJGI|BP052273 similar to UniRef100_A7P0Q1 Cluster: Chromosom... 107 2e-22
>gnl|LJGI|TC58581 similar to UniRef100_P49608 Cluster: Aconitate hydratase,
cytoplasmic; n=1; Cucurbita maxima|Rep: Aconitate
hydratase, cytoplasmic - Cucurbita maxima (Pumpkin)
(Winter squash), partial (44%)
Length = 1502
Score = 2422 bits (1222), Expect = 0.0
Identities = 1222/1222 (100%)
Strand = Plus / Plus
Query: 1 atgctggaatctgccattcgtaattgtcactggggacaagatattactaaagaagatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atgctggaatctgccattcgtaattgtcactggggacaagatattactaaagaagatgtt 340
Query: 61 gagatgattattgactgggaaagctcttcaacgaagcaagttgagattcctttcattcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gagatgattattgactgggaaagctcttcaacgaagcaagttgagattcctttcattcca 400
Query: 121 gctcgtgttctcctgcaggattttactcaagttccagctaatgtaatcctggcctgcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gctcgtgttctcctgcaggattttactcaagttccagctaatgtaatcctggcctgcata 460
Query: 181 cgagatgatctggtttctgttaatctcgtcactggtcattcagttgaagttgatgtggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 cgagatgatctggtttctgttaatctcgtcactggtcattcagttgaagttgatgtggct 520
Query: 241 aatctggagcttgagttccagagaagcaaggagatatgtgattcccgtagacgggtttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aatctggagcttgagttccagagaagcaaggagatatgtgattcccgtagacgggtttca 580
Query: 301 aaatcttgccacaacatgcttgtagttcctcctggttcgggaccacatcaagtcaatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aaatcttgccacaacatgcttgtagttcctcctggttcgggaccacatcaagtcaatctt 640
Query: 361 gaatatctcagcagtgttgtattcaacgccgagggcttactctatcctgacagtgtggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gaatatctcagcagtgttgtattcaacgccgagggcttactctatcctgacagtgtggtt 700
Query: 421 gggattgattcacacacaactatgataaatgggcttggagtttctggatggggtgttggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gggattgattcacacacaactatgataaatgggcttggagtttctggatggggtgttggg 760
Query: 481 cgtattgaagcagaggcagtaatgtatggcaagcctatgaacatgatattaccttgtgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 cgtattgaagcagaggcagtaatgtatggcaagcctatgaacatgatattaccttgtgtt 820
Query: 541 gttggattcaagttgtctggaaaattgcgcaacggtattacaacaactgatttggctcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gttggattcaagttgtctggaaaattgcgcaacggtattacaacaactgatttggctcta 880
Query: 601 actattacacaaatacttcgtgaacatggtgttgttgggaagtttgttgagttttatggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 actattacacaaatacttcgtgaacatggtgttgttgggaagtttgttgagttttatggt 940
Query: 661 gatggtatgcgccgattatcattagctgacagggccactattgccaatatggctcctgag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 gatggtatgcgccgattatcattagctgacagggccactattgccaatatggctcctgag 1000
Query: 721 tatggagcgagcatgggtttctttcccgtagataatgttacactacaatacctcaagtta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 tatggagcgagcatgggtttctttcccgtagataatgttacactacaatacctcaagtta 1060
Query: 781 acgggaagaagtgaagagactgtggcaatgatagaggcctacctcagggaaaacaaaatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 acgggaagaagtgaagagactgtggcaatgatagaggcctacctcagggaaaacaaaatg 1120
Query: 841 tttgtggactatgatgagcctcaacaagaaagagtttattcatcctatcttgaattgaac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 tttgtggactatgatgagcctcaacaagaaagagtttattcatcctatcttgaattgaac 1180
Query: 901 cttgatgaagttgaaccatgtatctcagtgccaaagagacctcatgatcgggtgcctttg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 cttgatgaagttgaaccatgtatctcagtgccaaagagacctcatgatcgggtgcctttg 1240
Query: 961 aaagaaatgaagactgattggcatgcttgtcttgatagcaaagtggggtataagggattt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1241 aaagaaatgaagactgattggcatgcttgtcttgatagcaaagtggggtataagggattt 1300
Query: 1021 ctttcaatagtagaagatgcagaaaacaaagttgcaaaatttgatttccacgggcagcca 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 ctttcaatagtagaagatgcagaaaacaaagttgcaaaatttgatttccacgggcagcca 1360
Query: 1081 gcagagctcaaggatggaagcgttgtgattgctttaatcacaagctgtacaaatacgtca 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 gcagagctcaaggatggaagcgttgtgattgctttaatcacaagctgtacaaatacgtca 1420
Query: 1141 aacctgagcgttatgcttgaggctggtcttgttgcaaagaaggcttatgagctaggtttg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 aacctgagcgttatgcttgaggctggtcttgttgcaaagaaggcttatgagctaggtttg 1480
Query: 1201 caggttaagccttgggttaaaa 1222
||||||||||||||||||||||
Sbjct: 1481 caggttaagccttgggttaaaa 1502
>gnl|LJGI|FS321103 similar to UniRef100_Q9FVE9 Cluster: Cytosolic aconitase; n=1;
Nicotiana tabacum|Rep: Cytosolic aconitase - Nicotiana
tabacum (Common tobacco), partial (16%)
Length = 812
Score = 924 bits (466), Expect = 0.0
Identities = 469/470 (99%)
Strand = Plus / Plus
Query: 1 atgctggaatctgccattcgtaattgtcactggggacaagatattactaaagaagatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atgctggaatctgccattcgtaattgtcactggggacaagatattactaaagaagatgtt 402
Query: 61 gagatgattattgactgggaaagctcttcaacgaagcaagttgagattcctttcattcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gagatgattattgactgggaaagctcttcaacgaagcaagttgagattcctttcattcca 462
Query: 121 gctcgtgttctcctgcaggattttactcaagttccagctaatgtaatcctggcctgcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gctcgtgttctcctgcaggattttactcaagttccagctaatgtaatcctggcctgcata 522
Query: 181 cgagatgatctggtttctgttaatctcgtcactggtcattcagttgaagttgatgtggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 cgagatgatctggtttctgttaatctcgtcactggtcattcagttgaagttgatgtggct 582
Query: 241 aatctggagcttgagttccagagaagcaaggagatatgtgattcccgtagacgggtttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aatctggagcttgagttccagagaagcaaggagatatgtgattcccgtagacgggtttca 642
Query: 301 aaatcttgccacaacatgcttgtagttcctcctggttcgggaccacatcaagtcaatctt 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 643 aaatcttgccacaacatgcttgtagttccccctggttcgggaccacatcaagtcaatctt 702
Query: 361 gaatatctcagcagtgttgtattcaacgccgagggcttactctatcctgacagtgtggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gaatatctcagcagtgttgtattcaacgccgagggcttactctatcctgacagtgtggtt 762
Query: 421 gggattgattcacacacaactatgataaatgggcttggagtttctggatg 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gggattgattcacacacaactatgataaatgggcttggagtttctggatg 812
>gnl|LJGI|TC64400 similar to UniRef100_Q9FVE9 Cluster: Cytosolic aconitase; n=1;
Nicotiana tabacum|Rep: Cytosolic aconitase - Nicotiana
tabacum (Common tobacco), partial (13%)
Length = 700
Score = 432 bits (218), Expect = e-120
Identities = 218/218 (100%)
Strand = Plus / Plus
Query: 1265 ttcagagtggcctgcaaaagtatctaaatgaacagggtttccaaattgttggatttggtt 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcagagtggcctgcaaaagtatctaaatgaacagggtttccaaattgttggatttggtt 60
Query: 1325 gcaccacaggcattggaaattcaggggatttggacaaatcagttgcttctgctatctcag 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaccacaggcattggaaattcaggggatttggacaaatcagttgcttctgctatctcag 120
Query: 1385 aaaatgacatcagagcggctgctgtgttttctgggaaccgtaatgttgaggggcgtgtcc 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaatgacatcagagcggctgctgtgttttctgggaaccgtaatgttgaggggcgtgtcc 180
Query: 1445 cccgtgtgcatcctttgacacaaactaacttgcttgta 1482
||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccgtgtgcatcctttgacacaaactaacttgcttgta 218
>gnl|LJGI|AU089244 homologue to UniRef100_A7P0Q1 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 345
Score = 180 bits (91), Expect = 2e-44
Identities = 199/235 (84%)
Strand = Plus / Plus
Query: 1210 ccttgggttaaaacaagtcttactccagtctctggagttgtcacagaatatctacttcag 1269
||||||||||||||||||||| |||| | || |||||||| || |||||||||| |||
Sbjct: 7 ccttgggttaaaacaagtcttgctcctggttcaggagttgttacgaaatatctactccag 66
Query: 1270 agtggcctgcaaaagtatctaaatgaacagggtttccaaattgttggatttggttgcacc 1329
||||| ||||||| ||||| |||||||| ||||| | |||||||||||||| |||||
Sbjct: 67 agtgggctgcaaagttatctcaatgaacaaggttttaatattgttggatttggctgcaca 126
Query: 1330 acaggcattggaaattcaggggatttggacaaatcagttgcttctgctatctcagaaaat 1389
||| | ||||| |||||||| ||| |||| |||| ||||||||||||||||||||||||
Sbjct: 127 acatgtattggcaattcaggcgatctggatgaatctgttgcttctgctatctcagaaaat 186
Query: 1390 gacatcagagcggctgctgtgttttctgggaaccgtaatgttgaggggcgtgtcc 1444
||||| | | ||||||||||| ||||| ||||||||| ||||||| |||||||
Sbjct: 187 gacattgtacctgctgctgtgttgtctggaaaccgtaattttgagggccgtgtcc 241
>gnl|LJGI|TC82096 homologue to UniRef100_Q9SIB9 Cluster: Aconitate hydratase 2,
mitochondrial precursor; n=2; Arabidopsis thaliana|Rep:
Aconitate hydratase 2, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (23%)
Length = 712
Score = 168 bits (85), Expect = 6e-41
Identities = 180/211 (85%), Gaps = 3/211 (1%)
Strand = Plus / Plus
Query: 313 aacatgcttgtagttcctcctggttcgggacca---catcaagtcaatcttgaatatctc 369
||||||||||| |||||||||||||| ||| | ||||| |||||||||||||||||
Sbjct: 499 aacatgcttgttgttcctcctggttctggaatagtacatcaggtcaatcttgaatatctt 558
Query: 370 agcagtgttgtattcaacgccgagggcttactctatcctgacagtgtggttgggattgat 429
| | ||||| |||||| ||||||||||||||||||||||||||| ||||||| |||
Sbjct: 559 gggcgggttgttttcaacaacgagggcttactctatcctgacagtgtagttgggaccgat 618
Query: 430 tcacacacaactatgataaatgggcttggagtttctggatggggtgttgggcgtattgaa 489
||||| |||||||||||| ||||||| || ||| |||||||||||||||| ||||||||
Sbjct: 619 tcacatacaactatgatagatgggctcggtgttgctggatggggtgttggaggtattgaa 678
Query: 490 gcagaggcagtaatgtatggcaagcctatga 520
|| ||||||| |||| |||| |||||||||
Sbjct: 679 gccgaggcagaaatgcttggccagcctatga 709
Score = 91.7 bits (46), Expect = 1e-17
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 46 actaaagaagatgttgagatgattattgactgggaaagctcttcaacgaagcaagttgag 105
|||||||||||||| |||| |||||| |||||||||| |||| | ||||||||||||
Sbjct: 168 actaaagaagatgtagagaagattatggactgggaaaagacttcttctaagcaagttgag 227
Query: 106 attcctttcattccagctcgtgttctcctgcaggattttactcaagttccagct 159
|||||||||| || ||||| |||||| |||||||||| ||| ||||||||||
Sbjct: 228 attcctttcaagcctgctcgagttctcttgcaggatttgactggagttccagct 281
>gnl|LJGI|TC76350 similar to UniRef100_A7P0Q1 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 817
Score = 115 bits (58), Expect = 8e-25
Identities = 100/114 (87%)
Strand = Plus / Plus
Query: 46 actaaagaagatgttgagatgattattgactgggaaagctcttcaacgaagcaagttgag 105
||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||||
Sbjct: 570 actaaagaagatgttgagaagattattgactgggaaaagacttcttctaagcaagttgag 629
Query: 106 attcctttcattccagctcgtgttctcctgcaggattttactcaagttccagct 159
|||||||||| || ||||| |||||| |||||||||||||| ||||||||||
Sbjct: 630 attcctttcaagcctgctcgagttctcttgcaggattttactggagttccagct 683
>gnl|LJGI|TC78634 similar to UniRef100_A7P0Q1 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 849
Score = 111 bits (56), Expect = 1e-23
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 44 ttactaaagaagatgttgagatgattattgactgggaaagctcttcaacgaagcaagttg 103
|||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 522 ttaccaaagaagatgttgagaagattattgactgggaaagctcttttgtgaagcaagttg 581
Query: 104 agattcctttcattccagctcgtgttctcctgcaggattt 143
|||||||||||| || |||||||| ||||| ||||||||
Sbjct: 582 agattcctttcaagcccgctcgtgtactcctacaggattt 621
Score = 61.9 bits (31), Expect = 1e-08
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 189 tctggtttctgttaatctcgtcactggtcattcagttgaagttgatgtggc 239
||||||| ||||| ||||||||| || |||||||||| |||||||||||||
Sbjct: 706 tctggttcctgttgatctcgtcattgatcattcagttcaagttgatgtggc 756
Score = 60.0 bits (30), Expect = 4e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 237 ggctaatctggagcttgagttccagagaagcaaggaga 274
||||||| ||||||||||||||||||||| ||||||||
Sbjct: 778 ggctaatatggagcttgagttccagagaaacaaggaga 815
>gnl|LJGI|BP052273 similar to UniRef100_A7P0Q1 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 543
Score = 107 bits (54), Expect = 2e-22
Identities = 99/114 (86%)
Strand = Plus / Minus
Query: 46 actaaagaagatgttgagatgattattgactgggaaagctcttcaacgaagcaagttgag 105
||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||||
Sbjct: 291 actaaagaagatgttgagaagattattgactgggaaaagacttcttctaagcaagttgag 232
Query: 106 attcctttcattccagctcgtgttctcctgcaggattttactcaagttccagct 159
|||||| ||| || ||||| |||||| |||||||||||||| ||||||||||
Sbjct: 231 attcctctcaagcctgctcgagttctcttgcaggattttactggagttccagct 178