Miyakogusa Predicted Gene

Lj0g3v0293109.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0293109.1 Non Chatacterized Hit- tr|C3Z7P2|C3Z7P2_BRAFL
Putative uncharacterized protein OS=Branchiostoma
flor,34.67,2.1,seg,NULL,CUFF.19614.1
         (319 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80247                                                      583   e-166

>gnl|LJGI|TC80247 
          Length = 807

 Score =  583 bits (294), Expect = e-166
 Identities = 311/319 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaatttttctgggatttctttaggcgttttatcttttatggtcggagtttttgttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atggaatttttctgggatttctttaggcgttttatcttttatggtcggagtttttgttca 323

                                                                       
Query: 61  atccacgttgtagattataacttactggggatttgtactttacaatcttttttcagattg 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 atccacgttgtagattataacttactggggatttgtacttcacaatcttttttcagattg 383

                                                                       
Query: 121 ttcatgtatcaatataaatcatttttctttcggggnnnnnnntcaccaacacaattgacc 180
           |||||||||||||||||||||||||||||||||||       ||||||||||||||||||
Sbjct: 384 ttcatgtatcaatataaatcatttttctttcggggaaaaaaatcaccaacacaattgacc 443

                                                                       
Query: 181 tctaacataaaaaatcaaccaagttcaaattatttagcatcttccacgatctatgcatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctaacataaaaaatcaaccaagttcaaattatttagcatcttccacgatctatgcatct 503

                                                                       
Query: 241 tacattcacccaacaaataactaccgacaaatcacttttaataataatatgcctcatatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tacattcacccaacaaataactaccgacaaatcacttttaataataatatgcctcatatt 563

                              
Query: 301 ataatgttgacaaaataaa 319
           |||||||||||||||||||
Sbjct: 564 ataatgttgacaaaataaa 582