Miyakogusa Predicted Gene
- Lj0g3v0292969.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0292969.1 tr|G7JTZ1|G7JTZ1_MEDTR Transcription factor
bHLH25 OS=Medicago truncatula GN=MTR_4g092700 PE=4
SV=1,62.7,0,SUBFAMILY NOT NAMED,NULL; CIRCADIAN PROTEIN
CLOCK/ARNT/BMAL/PAS,NULL; coiled-coil,NULL;
HLH,Helix-lo,gene.g22770.t1.1
(879 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71042 similar to UniRef100_O81348 Cluster: Symbiotic ... 1187 0.0
gnl|LJGI|TC80043 similar to UniRef100_O81348 Cluster: Symbiotic ... 934 0.0
gnl|LJGI|TC79026 similar to UniRef100_O81348 Cluster: Symbiotic ... 543 e-154
gnl|LJGI|FS353944 similar to UniRef100_O81348 Cluster: Symbiotic... 172 2e-42
gnl|LJGI|TC67128 weakly similar to UniRef100_A7R3V3 Cluster: Chr... 70 3e-11
gnl|LJGI|FS327613 similar to UniRef100_O81348 Cluster: Symbiotic... 54 2e-06
gnl|LJGI|TC73883 similar to UniRef100_Q1PF17 Cluster: Basic heli... 52 6e-06
>gnl|LJGI|TC71042 similar to UniRef100_O81348 Cluster: Symbiotic ammonium
transporter; n=1; Glycine max|Rep: Symbiotic ammonium
transporter - Glycine max (Soybean), partial (50%)
Length = 1031
Score = 1187 bits (599), Expect = 0.0
Identities = 606/607 (99%), Gaps = 1/607 (0%)
Strand = Plus / Plus
Query: 1 atggagatttcatccattacaggattacctgatcaggaaatgatgggggatcctacatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atggagatttcatccattacaggattacctgatcaggaaatgatgggggatcctacatta 132
Query: 61 ctccatcagtggcacagtgatgattctagcttgctgccaatggctgctgcttttggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ctccatcagtggcacagtgatgattctagcttgctgccaatggctgctgcttttggagag 192
Query: 121 actttgcaacatcattcattcacttatccaaacttcaacctcataactcccatgaatcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 actttgcaacatcattcattcacttatccaaacttcaacctcataactcccatgaatcag 252
Query: 181 tttcagttgggttcaaatcacatgagtcagtttcagttggggttgcaaaaacttaaggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tttcagttgggttcaaatcacatgagtcagtttcagttggggttgcaaaaacttaaggat 312
Query: 241 gagatgggttgtccaacaatcaatatcacaactcctctggacatgatctctcaaggaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gagatgggttgtccaacaatcaatatcacaactcctctggacatgatctctcaaggaaac 372
Query: 301 cttgaggatcaaaactatgtcttcaagacctgccaggaggatcacaaaaagatattgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cttgaggatcaaaactatgtcttcaagacctgccaggaggatcacaaaaagatattgaca 432
Query: 361 cgtccaaaactttctcaacctcaggaccacattatagctgaaagaaagcggcgagagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cgtccaaaactttctcaacctcaggaccacattatagctgaaagaaagcggcgagagaag 492
Query: 421 ctcagccagcagttcattgctctatctgcccttgtccctggactacaaaagatggac-aa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 493 ctcagccagcagttcattgctctatctgcccttgtccctggactacaaaagatggacaaa 552
Query: 480 agcttctgttcttggagatactatcaagtacctgaagcaactgcaggagaaagtgagggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agcttctgttcttggagatactatcaagtacctgaagcaactgcaggagaaagtgagggc 612
Query: 540 tcttgaggaggagcagaacttgaagaaaaatgtgcagtctgtggtaattgtaaagaagtc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tcttgaggaggagcagaacttgaagaaaaatgtgcagtctgtggtaattgtaaagaagtc 672
Query: 600 tcaactt 606
|||||||
Sbjct: 673 tcaactt 679
Score = 394 bits (199), Expect = e-109
Identities = 199/199 (100%)
Strand = Plus / Plus
Query: 606 tggttcctttgacaaggaactgcctgaaattgaagcaagattttgtgagagaaatgttct 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tggttcctttgacaaggaactgcctgaaattgaagcaagattttgtgagagaaatgttct 774
Query: 666 catacgagttcactgtgagaagagcaaaggagtggtagaaaaaacaatccatgaaattga 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 catacgagttcactgtgagaagagcaaaggagtggtagaaaaaacaatccatgaaattga 834
Query: 726 gaaactccacctaaaagtcatcaatagcactgctttgacatttgggagctgtgcccttga 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gaaactccacctaaaagtcatcaatagcactgctttgacatttgggagctgtgcccttga 894
Query: 786 tataacaattattgctcag 804
|||||||||||||||||||
Sbjct: 895 tataacaattattgctcag 913
>gnl|LJGI|TC80043 similar to UniRef100_O81348 Cluster: Symbiotic ammonium
transporter; n=1; Glycine max|Rep: Symbiotic ammonium
transporter - Glycine max (Soybean), partial (50%)
Length = 1366
Score = 934 bits (471), Expect = 0.0
Identities = 471/471 (100%)
Strand = Plus / Plus
Query: 1 atggagatttcatccattacaggattacctgatcaggaaatgatgggggatcctacatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atggagatttcatccattacaggattacctgatcaggaaatgatgggggatcctacatta 223
Query: 61 ctccatcagtggcacagtgatgattctagcttgctgccaatggctgctgcttttggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ctccatcagtggcacagtgatgattctagcttgctgccaatggctgctgcttttggagag 283
Query: 121 actttgcaacatcattcattcacttatccaaacttcaacctcataactcccatgaatcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 actttgcaacatcattcattcacttatccaaacttcaacctcataactcccatgaatcag 343
Query: 181 tttcagttgggttcaaatcacatgagtcagtttcagttggggttgcaaaaacttaaggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tttcagttgggttcaaatcacatgagtcagtttcagttggggttgcaaaaacttaaggat 403
Query: 241 gagatgggttgtccaacaatcaatatcacaactcctctggacatgatctctcaaggaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gagatgggttgtccaacaatcaatatcacaactcctctggacatgatctctcaaggaaac 463
Query: 301 cttgaggatcaaaactatgtcttcaagacctgccaggaggatcacaaaaagatattgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cttgaggatcaaaactatgtcttcaagacctgccaggaggatcacaaaaagatattgaca 523
Query: 361 cgtccaaaactttctcaacctcaggaccacattatagctgaaagaaagcggcgagagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cgtccaaaactttctcaacctcaggaccacattatagctgaaagaaagcggcgagagaag 583
Query: 421 ctcagccagcagttcattgctctatctgcccttgtccctggactacaaaag 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctcagccagcagttcattgctctatctgcccttgtccctggactacaaaag 634
Score = 394 bits (199), Expect = e-109
Identities = 199/199 (100%)
Strand = Plus / Plus
Query: 606 tggttcctttgacaaggaactgcctgaaattgaagcaagattttgtgagagaaatgttct 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 tggttcctttgacaaggaactgcctgaaattgaagcaagattttgtgagagaaatgttct 1151
Query: 666 catacgagttcactgtgagaagagcaaaggagtggtagaaaaaacaatccatgaaattga 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 catacgagttcactgtgagaagagcaaaggagtggtagaaaaaacaatccatgaaattga 1211
Query: 726 gaaactccacctaaaagtcatcaatagcactgctttgacatttgggagctgtgcccttga 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 gaaactccacctaaaagtcatcaatagcactgctttgacatttgggagctgtgcccttga 1271
Query: 786 tataacaattattgctcag 804
|||||||||||||||||||
Sbjct: 1272 tataacaattattgctcag 1290
Score = 264 bits (133), Expect = 8e-70
Identities = 136/137 (99%)
Strand = Plus / Plus
Query: 470 agatggacaaagcttctgttcttggagatactatcaagtacctgaagcaactgcaggaga 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 agatggacaaagcttctgttcttggagatactatcaagtacctgaagcaactgcaggaga 979
Query: 530 aagtgagggctcttgaggaggagcagaacttgaagaaaaatgtgcagtctgtggtaattg 589
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 aagtgagggctcttgagggggagcagaacttgaagaaaaatgtgcagtctgtggtaattg 1039
Query: 590 taaagaagtctcaactt 606
|||||||||||||||||
Sbjct: 1040 taaagaagtctcaactt 1056
>gnl|LJGI|TC79026 similar to UniRef100_O81348 Cluster: Symbiotic ammonium
transporter; n=1; Glycine max|Rep: Symbiotic ammonium
transporter - Glycine max (Soybean), partial (37%)
Length = 804
Score = 543 bits (274), Expect = e-154
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 606 tggttcctttgacaaggaactgcctgaaattgaagcaagattttgtgagagaaatgttct 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tggttcctttgacaaggaactgcctgaaattgaagcaagattttgtgagagaaatgttct 189
Query: 666 catacgagttcactgtgagaagagcaaaggagtggtagaaaaaacaatccatgaaattga 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 catacgagttcactgtgagaagagcaaaggagtggtagaaaaaacaatccatgaaattga 249
Query: 726 gaaactccacctaaaagtcatcaatagcactgctttgacatttgggagctgtgcccttga 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gaaactccacctaaaagtcatcaatagcactgctttgacatttgggagctgtgcccttga 309
Query: 786 tataacaattattgctcagatggatgtgggattttgcatgacagtcaaggatcttgtgag 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tataacaattattgctcagatggatgtgggattttgcatgacagtcaaggatcttgtgag 369
Query: 846 aaaactacgttcagcttttacatctttcatgtga 879
||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaactacgttcagcttttacatctttcatgtga 403
Score = 186 bits (94), Expect = 2e-46
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 513 gaagcaactgcaggagaaagtgagggctcttgaggaggagcagaacttgaagaaaaatgt 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagcaactgcaggagaaagtgagggctcttgaggaggagcagaacttgaagaaaaatgt 60
Query: 573 gcagtctgtggtaattgtaaagaagtctcaactt 606
||||||||||||||||||||||||||||||||||
Sbjct: 61 gcagtctgtggtaattgtaaagaagtctcaactt 94
>gnl|LJGI|FS353944 similar to UniRef100_O81348 Cluster: Symbiotic ammonium
transporter; n=1; Glycine max|Rep: Symbiotic ammonium
transporter - Glycine max (Soybean), partial (13%)
Length = 674
Score = 172 bits (87), Expect = 2e-42
Identities = 129/143 (90%)
Strand = Plus / Minus
Query: 737 taaaagtcatcaatagcactgctttgacatttgggagctgtgcccttgatataacaatta 796
||||||| |||||||||| ||| |||||||||||||||| |||||||||||| || ||||
Sbjct: 666 taaaagttatcaatagcagtgccttgacatttgggagctttgcccttgatattaccatta 607
Query: 797 ttgctcagatggatgtgggattttgcatgacagtcaaggatcttgtgagaaaactacgtt 856
|||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 606 ttgctcagatggatatgggattttgcatgacaggaaaggatcttgtgagaaacctacgtt 547
Query: 857 cagcttttacatctttcatgtga 879
||||| | ||||| ||||||||
Sbjct: 546 cagctctatcatctctcatgtga 524
>gnl|LJGI|TC67128 weakly similar to UniRef100_A7R3V3 Cluster: Chromosome chr7
scaffold_572, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_572, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (71%)
Length = 1601
Score = 69.9 bits (35), Expect = 3e-11
Identities = 110/135 (81%)
Strand = Plus / Plus
Query: 381 tcaggaccacattatagctgaaagaaagcggcgagagaagctcagccagcagttcattgc 440
|||||| ||||| |||||||| |||| ||| ||||||||||||||||| || |||||
Sbjct: 616 tcaggatcacatcatagctgagagaaggcgtagagagaagctcagccagagcttaattgc 675
Query: 441 tctatctgcccttgtccctggactacaaaagatggacaaagcttctgttcttggagatac 500
||| | |||||| | ||||| || | ||||||||||| ||||| || |||||||| |
Sbjct: 676 tcttgcagcccttattcctggtttaaagaagatggacaaggcttcagtccttggagacgc 735
Query: 501 tatcaagtacctgaa 515
|||||||||| ||||
Sbjct: 736 tatcaagtacgtgaa 750
>gnl|LJGI|FS327613 similar to UniRef100_O81348 Cluster: Symbiotic ammonium
transporter; n=1; Glycine max|Rep: Symbiotic ammonium
transporter - Glycine max (Soybean), partial (23%)
Length = 794
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 106 gctgcttttggagagactttgcaacatcattcattcact 144
||||||||||||||| |||||||| | ||||||||||||
Sbjct: 454 gctgcttttggagaggctttgcaaaaacattcattcact 492
>gnl|LJGI|TC73883 similar to UniRef100_Q1PF17 Cluster: Basic helix-loop-helix family
protein; n=2; Arabidopsis thaliana|Rep: Basic
helix-loop-helix family protein - Arabidopsis thaliana
(Mouse-ear cress), partial (14%)
Length = 644
Score = 52.0 bits (26), Expect = 6e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 388 cacattatagctgaaagaaagcggcgagagaagctcagccagcagttcattgctctatct 447
||||| || ||||| |||||| || |||| ||| | |||||||||||||||||||| ||
Sbjct: 543 cacataattgctgagagaaagaggagagaaaagattagccagcagttcattgctctttca 602
Query: 448 gccctt 453
||||||
Sbjct: 603 gccctt 608