Miyakogusa Predicted Gene

Lj0g3v0292949.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0292949.1 tr|G7JTY5|G7JTY5_MEDTR Squalene epoxidase
OS=Medicago truncatula GN=MTR_4g092640 PE=4
SV=1,69.05,0.00000000000007,no description,NULL;
seg,NULL,NODE_51951_length_404_cov_44.841583.path2.1
         (249 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO036224 homologue to UniRef100_Q2HY08 Cluster: Squalen...   486   e-137

>gnl|LJGI|GO036224 homologue to UniRef100_Q2HY08 Cluster: Squalene epoxidase; n=1;
           Medicago sativa|Rep: Squalene epoxidase - Medicago
           sativa (Alfalfa), partial (20%)
          Length = 647

 Score =  486 bits (245), Expect = e-137
 Identities = 248/249 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggattatcagtatttgctgggaggtatattggcttgttacgcttgtagtttggccttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atggattatcagtatttgctgggaggtatattggcttgttacgcttgtagtttggccttt 194

                                                                       
Query: 61  ttgtttgttctgtacagttttgcagcaaagaggaatgccacaagttcaagtttattacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttgtttgttctgtacagttttgcagcaaagaggaatgccacaagttcaagtttattacat 254

                                                                       
Query: 121 ttaaagagtaatgggtgtgcaaagacatcagaaaatggaatatgccaacaaaagggtgaa 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttaaagagtaatgggagtgcaaagacatcagaaaatggaatatgccaacaaaagggtgaa 314

                                                                       
Query: 181 ggaagtatagatgtcatcattgttggtgctggggttgctggtgcagctcttgcttacaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ggaagtatagatgtcatcattgttggtgctggggttgctggtgcagctcttgcttacaca 374

                    
Query: 241 cttggaaag 249
           |||||||||
Sbjct: 375 cttggaaag 383