Miyakogusa Predicted Gene

Lj0g3v0292789.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0292789.2 Non Chatacterized Hit- tr|I0Z677|I0Z677_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,30.3,6e-17,UNCHARACTERIZED,NULL; PX SERINE/THREONINE KINASE
(PXK),NULL; Nexin_C,Sorting nexin, C-terminal; seg,,CUFF.19584.2
         (1002 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71589 similar to UniRef100_A7P7B1 Cluster: Chromosome...   272   4e-72

>gnl|LJGI|TC71589 similar to UniRef100_A7P7B1 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 567

 Score =  272 bits (137), Expect = 4e-72
 Identities = 139/140 (99%)
 Strand = Plus / Plus

                                                                       
Query: 805 ccgacgatgagcgatgagcagaaacaggaggcagatcggcgtgccaagtttgtatatgag 864
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1   ccgacgatgagcgatgagcagaaacaggagncagatcggcgtgccaagtttgtatatgag 60

                                                                       
Query: 865 ctaatgattgaaaatgcaccacctgcaatcgtaagtcttgttggtcgaaaggagtatgag 924
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctaatgattgaaaatgcaccacctgcaatcgtaagtcttgttggtcgaaaggagtatgag 120

                               
Query: 925 caatgtgctagggatctata 944
           ||||||||||||||||||||
Sbjct: 121 caatgtgctagggatctata 140