Miyakogusa Predicted Gene

Lj0g3v0292459.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0292459.1 Non Chatacterized Hit- tr|F6HR57|F6HR57_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,89.83,0,coiled-coil,NULL; TRANSCRIPTION FACTOR DP,Transcription
factor DP; E2F_TDP,Transcription factor E2F/,CUFF.19555.1
         (354 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67515 similar to UniRef100_Q7XZI4 Cluster: DP1; n=1; ...   351   2e-96

>gnl|LJGI|TC67515 similar to UniRef100_Q7XZI4 Cluster: DP1; n=1; Populus tremula x
           Populus tremuloides|Rep: DP1 - Populus tremula x Populus
           tremuloides, partial (39%)
          Length = 751

 Score =  351 bits (177), Expect = 2e-96
 Identities = 186/189 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaagtatgtgagaaggtagaaagcaagggaagaacaacttacaatgaggtagcagac 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atgaaagtgtgtgagaaggtagaaagcaagggaagaacaacttacaatgaggtagcagac 622

                                                                       
Query: 61  gaactggttgctgaatttgctgatccaagcaatagcactttatccccagatcagcaacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaactggttgctgaatttgctgatccaagcaatagcactttatccccagatcagcaacaa 682

                                                                       
Query: 121 tatgacgagaaaaacattcgtcgaagagtgtatgatgctttgaacgttctcatggcgatg 180
           ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 683 tatgatgagaaaaacattcgtcgaagagtgtatgatactttgaacgttctcatggcgatg 742

                    
Query: 181 gatattatt 189
           |||||||||
Sbjct: 743 gatattatt 751