Miyakogusa Predicted Gene
- Lj0g3v0292309.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0292309.1 Non Chatacterized Hit- tr|I1MS61|I1MS61_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,92.25,0,seg,NULL;
SODIUM-DEPENDENT VITAMIN C TRANSPORTER,NULL; XANTHINE-URACIL / VITAMIN
C PERMEASE FAMILY M,CUFF.19549.1
(1737 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS334472 similar to UniRef100_A7PQI8 Cluster: Chromosom... 1310 0.0
gnl|LJGI|TC81356 similar to UniRef100_A7PQI8 Cluster: Chromosome... 559 e-158
gnl|LJGI|TC66192 similar to UniRef100_A7PQI8 Cluster: Chromosome... 547 e-155
gnl|LJGI|FS361457 similar to UniRef100_A7PQI8 Cluster: Chromosom... 351 9e-96
gnl|LJGI|DC595680 similar to UniRef100_A7PQI8 Cluster: Chromosom... 186 3e-46
gnl|LJGI|TC76930 similar to UniRef100_A7PQI8 Cluster: Chromosome... 86 9e-16
gnl|LJGI|DC599652 similar to UniRef100_A7PQI8 Cluster: Chromosom... 72 1e-11
gnl|LJGI|TC68108 similar to UniRef100_A7PQI8 Cluster: Chromosome... 62 1e-08
>gnl|LJGI|FS334472 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 692
Score = 1310 bits (661), Expect = 0.0
Identities = 682/692 (98%)
Strand = Plus / Plus
Query: 485 ggtatactggacttatgtcgctgttagtaaggttgatcaatcccgtggttgtatccccaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtatactggacttatgtcgctgttagtaaggttgatcaatcccgtggttgtatccccaa 60
Query: 545 ctattgctgcagtcggactttcattttacagttacggttttccactagtgggtacatgtc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctattgctgcagtcggactttcattttacagttacggttttccactagtgggtacatgtc 120
Query: 605 ttgagatcggagcaatacagatattagtggctannnnnnnnnctctttatcttcgtaaga 664
||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 ttgagatcggagcaatacagatattagtggctatttttttttctctttatcttcgtaaga 180
Query: 665 tatctgttcttggacaccgcatatttctaatatatgcagttcctttgggtctagctatta 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatctgttcttggacaccgcatatttctaatatatgcagttcctttgggtctagctatta 240
Query: 725 catgggcagcagccttcttgctcactgaagctggagcctacaactacaaagggtgtgaca 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catgggcagcagccttcttgctcactgaagctggagcctacaactacaaagggtgtgaca 300
Query: 785 tcagcatacctgcctcaaatatggtttcagaacactgcagaaagcacatatcaaggatga 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcagcatacctgcctcaaatatggtttcagaacactgcagaaagcacatatcaaggatga 360
Query: 845 ggcattgtcgagttgatacatctcgtgcattgaaatcatccccatggtttagatttcctt 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcattgtcgagttgatacatctcgtgcattgaaatcatccccatggtttagatttcctt 420
Query: 905 atccactacaatggggtactcctgccttccactggaaaatggctcttgtgatgtgtgtgg 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atccactacaatggggtactcctgccttccactggaaaatggctcttgtgatgtgtgtgg 480
Query: 965 tttccttaatctcatctgtggattcggttggctcatatcatgcatcttcattattggtag 1024
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttccttgatctcatctgtggattcggttggctcatatcatgcatcttcattattggtag 540
Query: 1025 catccagacctccaactcctggagttcttagtcgaggaattggtttagaaggtctttgta 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catccagacctccaactcctggagttcttagtcgaggaattggtttagaaggtctttgta 600
Query: 1085 gtgtcttggctggtctctggggtactggtactgggtcttcaactttgactgaaaatgttc 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgtcttggctggtctctggggtactggtactgggtcttcaactttgactgaaaatgttc 660
Query: 1145 acacaattgctgtgactaaaatgggaagccgc 1176
||||||||||||||||||||||||||||||||
Sbjct: 661 acacaattgctgtgactaaaatgggaagccgc 692
>gnl|LJGI|TC81356 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 813
Score = 559 bits (282), Expect = e-158
Identities = 288/290 (99%)
Strand = Plus / Plus
Query: 6 tgagcacctgcccccgccgccgcggagagcggcgaggaatgaggatgttggtggtgcgtt 65
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tgagcagctgccaccgccgccgcggagagcggcgaggaatgaggatgttggtggtgcgtt 583
Query: 66 gccgctgagtgtggatgacgatggcttcgtgtctagacattcgcatatgaagtatgagct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gccgctgagtgtggatgacgatggcttcgtgtctagacattcgcatatgaagtatgagct 643
Query: 126 cagagattcacctggtttagttcctattggtatatacggcattcagcattatgtttcgat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cagagattcacctggtttagttcctattggtatatacggcattcagcattatgtttcgat 703
Query: 186 attaggttcgttgattctcattccgcttgtcattgttcctgccatgggaggaaatcatga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 attaggttcgttgattctcattccgcttgtcattgttcctgccatgggaggaaatcatga 763
Query: 246 tgatacttctgcggtggtttcaacagtgatgttcgtgtcgggagtgacta 295
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tgatacttctgcggtggtttcaacagtgatgttcgtgtcgggagtgacta 813
>gnl|LJGI|TC66192 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 684
Score = 547 bits (276), Expect = e-155
Identities = 276/276 (100%)
Strand = Plus / Plus
Query: 1462 cagccttacattgtggcttctcatgggcctttccgcagcaaatacggagggttaaattat 1521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cagccttacattgtggcttctcatgggcctttccgcagcaaatacggagggttaaattat 61
Query: 1522 ttcctaaacacgattttctcactacacatggtgatcgcttttcttgtcgctgttatcttg 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttcctaaacacgattttctcactacacatggtgatcgcttttcttgtcgctgttatcttg 121
Query: 1582 gataatactgtacctggtagtaagcaggaacgtggggtatatgtttggtcagaacctgat 1641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gataatactgtacctggtagtaagcaggaacgtggggtatatgtttggtcagaacctgat 181
Query: 1642 gttgctagaagggagcctgctgttgcgaatgactatgagttgcccttgagggttggtaag 1701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gttgctagaagggagcctgctgttgcgaatgactatgagttgcccttgagggttggtaag 241
Query: 1702 attttccgatgggtgaagtgggttggcctgtgaatg 1737
||||||||||||||||||||||||||||||||||||
Sbjct: 242 attttccgatgggtgaagtgggttggcctgtgaatg 277
>gnl|LJGI|FS361457 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 699
Score = 351 bits (177), Expect = 9e-96
Identities = 350/410 (85%)
Strand = Plus / Minus
Query: 1326 acgctacagtgaggccggaagctcccgcaatatcatcataattggtttatcattgnnnnn 1385
||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||
Sbjct: 699 acgctacagtgaggctggaagctctcgcaatatcatcatagttgggttatcattgttctt 640
Query: 1386 nnctctatccatacctgcctactttcaacaatacggcatctctccaaattccaacttgtc 1445
|||| || | ||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 639 ctctctttcggtgcctgcttactttcaacaatacgacatctctccaaattccaacttgtc 580
Query: 1446 agtgccaagttattttcagccttacattgtggcttctcatgggcctttccgcagcaaata 1505
||||| ||||| |||||||| |||||||| |||||||| |||||||||| | |||||||
Sbjct: 579 tgtgcctagttactttcagccctacattgtagcttctcacgggcctttccactgcaaata 520
Query: 1506 cggagggttaaattatttcctaaacacgattttctcactacacatggtgatcgcttttct 1565
|||||||| || ||| || | |||||| || | ||||||||||||||||| || |||||
Sbjct: 519 tggagggttgaactatgtcttgaacacgcttctttcactacacatggtgatagcgtttct 460
Query: 1566 tgtcgctgttatcttggataatactgtacctggtagtaagcaggaacgtggggtatatgt 1625
||| ||| ||||| ||||||||||||||||||| || |||||||||||||||||| ||
Sbjct: 459 tgttgcttttatcctggataatactgtacctggcggtcggcaggaacgtggggtatacgt 400
Query: 1626 ttggtcagaacctgatgttgctagaagggagcctgctgttgcgaatgactatgagttgcc 1685
|||||| ||| |||| ||||||| ||| |||||||||||||| | |||||| || |||||
Sbjct: 399 ttggtccgaatctgaggttgctaaaagagagcctgctgttgccagtgactacgaattgcc 340
Query: 1686 cttgagggttggtaagattttccgatgggtgaagtgggttggcctgtgaa 1735
||| | |||||| ||||||| |||||||||||||||||||||| ||||
Sbjct: 339 cttaggagttggtcggattttcagatgggtgaagtgggttggcctctgaa 290
>gnl|LJGI|DC595680 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 441
Score = 186 bits (94), Expect = 3e-46
Identities = 151/170 (88%)
Strand = Plus / Plus
Query: 990 ggttggctcatatcatgcatcttcattattggtagcatccagacctccaactcctggagt 1049
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 272 ggttgggtcataccatgcatcttcattattggtagcatccagacctccaactccaggagt 331
Query: 1050 tcttagtcgaggaattggtttagaaggtctttgtagtgtcttggctggtctctggggtac 1109
||||||| |||||||||||| |||||||||| |||||||||||| ||||||||||| ||
Sbjct: 332 tcttagttgaggaattggttgggaaggtctttctagtgtcttggccggtctctggggaac 391
Query: 1110 tggtactgggtcttcaactttgactgaaaatgttcacacaattgctgtga 1159
||| ||| |||| |||||| || | ||| |||| ||||||||||||||
Sbjct: 392 tggagctgtgtctacaacttcaacgggaaacgttcgcacaattgctgtga 441
>gnl|LJGI|TC76930 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 431
Score = 85.7 bits (43), Expect = 9e-16
Identities = 85/99 (85%)
Strand = Plus / Plus
Query: 1637 ctgatgttgctagaagggagcctgctgttgcgaatgactatgagttgcccttgagggttg 1696
|||| ||||||| ||| |||||||||||||| | |||||| || |||||||| | ||||
Sbjct: 132 ctgaggttgctaaaagagagcctgctgttgccagtgactacgaattgcccttaggagttg 191
Query: 1697 gtaagattttccgatgggtgaagtgggttggcctgtgaa 1735
|| ||||||| |||||||||||||||||||||| ||||
Sbjct: 192 gtcggattttcagatgggtgaagtgggttggcctctgaa 230
>gnl|LJGI|DC599652 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 538
Score = 71.9 bits (36), Expect = 1e-11
Identities = 87/104 (83%)
Strand = Plus / Minus
Query: 1627 tggtcagaacctgatgttgctagaagggagcctgctgttgcgaatgactatgagttgccc 1686
||||| ||| |||| ||| ||| ||| |||||||||||||| | || |||||| ||||||
Sbjct: 201 tggtccgaatctgaggttactaaaagagagcctgctgttgccagtgtctatgaattgccc 142
Query: 1687 ttgagggttggtaagattttccgatgggtgaagtgggttggcct 1730
|| | ||||| ||||||| ||||||||||||||||||||||
Sbjct: 141 ttaggagttggccggattttcagatgggtgaagtgggttggcct 98
>gnl|LJGI|TC68108 similar to UniRef100_A7PQI8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 717
Score = 61.9 bits (31), Expect = 1e-08
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 108 gcatatgaagtatgagctcagaga-ttcacctggtttagttcctattggt 156
|||||||||||| ||||||||||| |||||||| ||||||||| ||||||
Sbjct: 658 gcatatgaagtacgagctcagagatttcacctgntttagttcccattggt 707