Miyakogusa Predicted Gene

Lj0g3v0292189.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0292189.1 Non Chatacterized Hit- tr|G7JBM5|G7JBM5_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,82.03,0,no
description,NULL; no description,Transketolase-like, C-terminal;
DXP_synthase_N,Deoxyxylulose-5-p,CUFF.19527.1
         (2157 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78168 similar to UniRef100_A7P5N0 Cluster: Chromosome...  1273   0.0  
gnl|LJGI|TC63138 weakly similar to UniRef100_A7P5N0 Cluster: Chr...  1051   0.0  
gnl|LJGI|BP063322 weakly similar to UniRef100_A7P5N0 Cluster: Ch...   769   0.0  
gnl|LJGI|TC71317 similar to UniRef100_A7P5N0 Cluster: Chromosome...   648   0.0  

>gnl|LJGI|TC78168 similar to UniRef100_A7P5N0 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (29%)
          Length = 646

 Score = 1273 bits (642), Expect = 0.0
 Identities = 645/646 (99%)
 Strand = Plus / Plus

                                                                        
Query: 915  tgatgaatatgcccgtggtatgatgggtccactaggtgctactctttttgaagagcttgg 974
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tgatgaatatgcccgtggtatgatgggtccactaggtgctactctttttgaagagcttgg 60

                                                                        
Query: 975  attgtactacattggaccagtggatggacacaatatggaagatctagtatgtgtgttgca 1034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   attgtactacattggaccagtggatggacacaatatggaagatctagtatgtgtgttgca 120

                                                                        
Query: 1035 agaagtagcatccctggattcaatgggtcctgtgttagttcatgtgataaccgataaaaa 1094
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  agaagtagcatccctggattcaatgggtcctgtgttagttcatgtgataaccgataaaaa 180

                                                                        
Query: 1095 tcagggagtagaaaacaatcagaaaagtgatataacggacaggcatcagaatgattctgt 1154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tcagggagtagaaaacaatcagaaaagtgatataacggacaggcatcagaatgattctgt 240

                                                                        
Query: 1155 tgaaactgattttttaaaccatgatgttcgccctcaaacgtatggtgattgctttgtgga 1214
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241  tgaaactgattttttaaaccatgatgttcgccctcaagcgtatggtgattgctttgtgga 300

                                                                        
Query: 1215 gactttggttgcagaagcagagaaagacaaagatattgtggttgttcatgcaggaatgtt 1274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gactttggttgcagaagcagagaaagacaaagatattgtggttgttcatgcaggaatgtt 360

                                                                        
Query: 1275 gatggagccatcacttgaactgtttcgagaaaaatttccagatagattttttgatgtggg 1334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gatggagccatcacttgaactgtttcgagaaaaatttccagatagattttttgatgtggg 420

                                                                        
Query: 1335 aatggctgagcaacatgctgtgacatttgcttctggtttgtcatgtggtggattgaagcc 1394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  aatggctgagcaacatgctgtgacatttgcttctggtttgtcatgtggtggattgaagcc 480

                                                                        
Query: 1395 attttgcattataccttcttccttcctacaaagagcctatgaccaggtggttcatgatgt 1454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  attttgcattataccttcttccttcctacaaagagcctatgaccaggtggttcatgatgt 540

                                                                        
Query: 1455 tgatcaacagaaaattccagtgcgttttgtcattacaagtgcgggagtggttggttctga 1514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  tgatcaacagaaaattccagtgcgttttgtcattacaagtgcgggagtggttggttctga 600

                                                          
Query: 1515 tggtcccctccattgtggggcatttgacataaccttcatgtcatgc 1560
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tggtcccctccattgtggggcatttgacataaccttcatgtcatgc 646


>gnl|LJGI|TC63138 weakly similar to UniRef100_A7P5N0 Cluster: Chromosome chr4
           scaffold_6, whole genome shotgun sequence; n=2; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (16%)
          Length = 704

 Score = 1051 bits (530), Expect = 0.0
 Identities = 530/530 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgggtgctgttcctgctagataccctttgggaatccctttgcactctcacggtggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atgatgggtgctgttcctgctagataccctttgggaatccctttgcactctcacggtggt 234

                                                                       
Query: 61  gctctttctcgcagagtcgacttcaccacctcacacttccctgttcatcttgacctttca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gctctttctcgcagagtcgacttcaccacctcacacttccctgttcatcttgacctttca 294

                                                                       
Query: 121 agaattgccttgtgcccccgttctgcttctgaggaattcattgatagagtatgtgcacgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 agaattgccttgtgcccccgttctgcttctgaggaattcattgatagagtatgtgcacgg 354

                                                                       
Query: 181 tctgatattgatgattttgactgggaatgggacgaagttccgacacctattcttgacacg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tctgatattgatgattttgactgggaatgggacgaagttccgacacctattcttgacacg 414

                                                                       
Query: 241 gttgaaaatcctctttgcttgaagaacctttctcttaaggaactgaaacaactagctgct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gttgaaaatcctctttgcttgaagaacctttctcttaaggaactgaaacaactagctgct 474

                                                                       
Query: 301 gaaatccgtatggacctatcttctcttatgtcagatacacaaatatcaccgaaagcaagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaaatccgtatggacctatcttctcttatgtcagatacacaaatatcaccgaaagcaagt 534

                                                                       
Query: 361 atggcagtagcggagctgacggttgcaatgcatcatgtttttcatgctccagtagacaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atggcagtagcggagctgacggttgcaatgcatcatgtttttcatgctccagtagacaag 594

                                                                       
Query: 421 atattgtgggatgttggggatcaaacatatgcacataagattcttacaggaaggcgatca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 atattgtgggatgttggggatcaaacatatgcacataagattcttacaggaaggcgatca 654

                                                             
Query: 481 cttatgaagacaatgagacaaaagaatggtctttctggttttacatcccg 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cttatgaagacaatgagacaaaagaatggtctttctggttttacatcccg 704


>gnl|LJGI|BP063322 weakly similar to UniRef100_A7P5N0 Cluster: Chromosome chr4
           scaffold_6, whole genome shotgun sequence; n=2; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 511

 Score =  769 bits (388), Expect = 0.0
 Identities = 390/391 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgggtgctgttcctgctagataccctttgggaatccctttgcactctcacggtggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgatgggtgctgttcctgctagataccctttgggaatccctttgcactctcacggtggt 180

                                                                       
Query: 61  gctctttctcgcagagtcgacttcaccacctcacacttccctgttcatcttgacctttca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctctttctcgcagagtcgacttcaccacctcacacttccctgttcatcttgacctttca 240

                                                                       
Query: 121 agaattgccttgtgcccccgttctgcttctgaggaattcattgatagagtatgtgcacgg 180
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaatngccttgtgcccccgttctgcttctgaggaattcattgatagagtatgtgcacgg 300

                                                                       
Query: 181 tctgatattgatgattttgactgggaatgggacgaagttccgacacctattcttgacacg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctgatattgatgattttgactgggaatgggacgaagttccgacacctattcttgacacg 360

                                                                       
Query: 241 gttgaaaatcctctttgcttgaagaacctttctcttaaggaactgaaacaactagctgct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgaaaatcctctttgcttgaagaacctttctcttaaggaactgaaacaactagctgct 420

                                                                       
Query: 301 gaaatccgtatggacctatcttctcttatgtcagatacacaaatatcaccgaaagcaagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaatccgtatggacctatcttctcttatgtcagatacacaaatatcaccgaaagcaagt 480

                                          
Query: 361 atggcagtagcggagctgacggttgcaatgc 391
           |||||||||||||||||||||||||||||||
Sbjct: 481 atggcagtagcggagctgacggttgcaatgc 511


>gnl|LJGI|TC71317 similar to UniRef100_A7P5N0 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (15%)
          Length = 570

 Score =  648 bits (327), Expect = 0.0
 Identities = 327/327 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1831 gaggtgactgttgctgacgcaaggttctgcaagccccttgacatcaagcttctgaggcat 1890
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gaggtgactgttgctgacgcaaggttctgcaagccccttgacatcaagcttctgaggcat 60

                                                                        
Query: 1891 ctttgtaaacaccattcttttctaattactgttgaggaaggttccgtagggggatttggt 1950
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctttgtaaacaccattcttttctaattactgttgaggaaggttccgtagggggatttggt 120

                                                                        
Query: 1951 tcccatgttgctcagtttattgcactggatggactgcttgatagaggaatcaagtggcga 2010
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tcccatgttgctcagtttattgcactggatggactgcttgatagaggaatcaagtggcga 180

                                                                        
Query: 2011 ccaattgtcttaccagacagatacattgagcatgcatctccaaatgagcagcttgaccaa 2070
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ccaattgtcttaccagacagatacattgagcatgcatctccaaatgagcagcttgaccaa 240

                                                                        
Query: 2071 gcagggttgactggacatcacattgctgcaaccgcgttgagtttgctcggccgtacccgt 2130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gcagggttgactggacatcacattgctgcaaccgcgttgagtttgctcggccgtacccgt 300

                                       
Query: 2131 gaagctctccagtttatgtgcttctga 2157
            |||||||||||||||||||||||||||
Sbjct: 301  gaagctctccagtttatgtgcttctga 327