Miyakogusa Predicted Gene

Lj0g3v0292169.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0292169.1 Non Chatacterized Hit- tr|I1MBC7|I1MBC7_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,69.7,8e-18,PP2C-like,Protein phosphatase 2C-like; no
description,Protein phosphatase 2C-like; PREDICTED
PROTEIN,CUFF.19593.1
         (264 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76634 similar to UniRef100_O24078 Cluster: Protein ph...   492   e-139
gnl|LJGI|BP058189 similar to UniRef100_O24078 Cluster: Protein p...   410   e-114
gnl|LJGI|TC77388 similar to UniRef100_O82520 Cluster: 3-oxoacyl-...    86   1e-16
gnl|LJGI|TC71509                                                       86   1e-16
gnl|LJGI|BP068230                                                      78   3e-14

>gnl|LJGI|TC76634 similar to UniRef100_O24078 Cluster: Protein phosphatase 2C; n=1;
           Medicago sativa|Rep: Protein phosphatase 2C - Medicago
           sativa (Alfalfa), partial (9%)
          Length = 591

 Score =  492 bits (248), Expect = e-139
 Identities = 260/264 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgattaatggtgtctattatcaaattccaaaagttataagtggtggatggctatgtgga 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 84  atgattaatggtgtctattatcaaattcccaaagttataagtggtggatggctatgtgga 143

                                                                       
Query: 61  ttatgtcatggcgtttggaggatccaaggatctctggctgtttctagaggaattggagat 120
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 144 ttatgtcatggcgtttggaggatcccaggatctctggctgtttctagaggaattggagat 203

                                                                       
Query: 121 gggcacatgaaacaatgggtgatagcagaacatgagaccagagttcttcttcttagaatt 180
           ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 204 gggcacatgaaaccatgggtgatagcagaacatgagacccgagttcttcttcttagaatt 263

                                                                       
Query: 181 gaggctcgacatgactttttaatcttagattcggatgcattatggggaaaggtgcaggac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaggctcgacatgactttttaatcttagattcggatgcattatggggaaaggtgcaggac 323

                                   
Query: 241 ttgatcaattcattgtactaacat 264
           ||||||||||||||||||||||||
Sbjct: 324 ttgatcaattcattgtactaacat 347


>gnl|LJGI|BP058189 similar to UniRef100_O24078 Cluster: Protein phosphatase 2C; n=1;
           Medicago sativa|Rep: Protein phosphatase 2C - Medicago
           sativa (Alfalfa), partial (9%)
          Length = 512

 Score =  410 bits (207), Expect = e-114
 Identities = 216/219 (98%)
 Strand = Plus / Minus

                                                                       
Query: 46  ggatggctatgtggattatgtcatggcgtttggaggatccaaggatctctggctgtttct 105
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 374 ggatggctatgtggattatgtcatggcgtttggaggatcccaggatctctggctgtttct 315

                                                                       
Query: 106 agaggaattggagatgggcacatgaaacaatgggtgatagcagaacatgagaccagagtt 165
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 314 agaggaattggagatgggcacatgaaaccatgggtgatagcagaacatgagaccagagtt 255

                                                                       
Query: 166 cttcttcttagaattgaggctcgacatgactttttaatcttagattcggatgcattatgg 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cttcttcttagaattgaggctcgacatgactttttaatcttagattcggatgcattatgg 195

                                                  
Query: 226 ggaaaggtgcaggacttgatcaattcattgtactaacat 264
           ||||||||||||||||||||| |||||||||||||||||
Sbjct: 194 ggaaaggtgcaggacttgatccattcattgtactaacat 156


>gnl|LJGI|TC77388 similar to UniRef100_O82520 Cluster:
           3-oxoacyl-[acyl-carrier-protein] synthase; n=1; Capsicum
           chinense|Rep: 3-oxoacyl-[acyl-carrier-protein] synthase
           - Capsicum chinense (Scotch bonnet) (Bonnet pepper),
           partial (18%)
          Length = 665

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 46/47 (97%)
 Strand = Plus / Plus

                                                          
Query: 1   atgattaatggtgtctattatcaaattccaaaagttataagtggtgg 47
           |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 343 atgattaatggtgtctattatcaaattccagaagttataagtggtgg 389


>gnl|LJGI|TC71509 
          Length = 513

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 46/47 (97%)
 Strand = Plus / Plus

                                                          
Query: 1   atgattaatggtgtctattatcaaattccaaaagttataagtggtgg 47
           |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 atgattaatggtgtctattatcaaattccagaagttataagtggtgg 251


>gnl|LJGI|BP068230 
          Length = 185

 Score = 77.8 bits (39), Expect = 3e-14
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                          
Query: 1   atgattaatggtgtctattatcaaattccaaaagttataagtggtgg 47
           |||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 106 atgattaatggtgtctattatcaaattccagaagctataagtggtgg 60