Miyakogusa Predicted Gene

Lj0g3v0292149.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0292149.1 Non Chatacterized Hit- tr|K3Z0N2|K3Z0N2_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,44.53,1e-17,seg,NULL,CUFF.19525.1
         (549 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64442                                                       84   1e-15

>gnl|LJGI|TC64442 
          Length = 795

 Score = 83.8 bits (42), Expect = 1e-15
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 369 aaggtggaaggggtttcttggtctcagaaaaagccacattggctccaagaaggttgataa 428
           ||||||||||||| |||||||||| |  ||   |||||||||||||||||||||||| | 
Sbjct: 454 aaggtggaaggggcttcttggtctaaagaagtaccacattggctccaagaaggttgagag 513

                                     
Query: 429 gagtgaaggttcttctaacagaggag 454
           |||||||||||||||  |||||||||
Sbjct: 514 gagtgaaggttcttcagacagaggag 539



 Score = 79.8 bits (40), Expect = 2e-14
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 168 agtgtcctctgactttgagttttctgtctcaaactacaacatgatgagtgctgatgagct 227
           |||||||||||||||||| |||||   | |||||||   |||||||||||||||||||||
Sbjct: 256 agtgtcctctgactttgaattttcaaccacaaactattccatgatgagtgctgatgagct 315

                                   
Query: 228 tttcagcaagggaaggttgttgcc 251
           ||||   |||||||||||||||||
Sbjct: 316 tttctctaagggaaggttgttgcc 339