Miyakogusa Predicted Gene
- Lj0g3v0292129.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0292129.2 Non Chatacterized Hit- tr|I1Q778|I1Q778_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,44,3e-18,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.19523.2
(1788 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322303 weakly similar to UniRef100_A7PL85 Cluster: Ch... 1221 0.0
gnl|LJGI|FS348894 similar to UniRef100_A7PL85 Cluster: Chromosom... 815 0.0
>gnl|LJGI|FS322303 weakly similar to UniRef100_A7PL85 Cluster: Chromosome chr7
scaffold_20, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_20, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (34%)
Length = 707
Score = 1221 bits (616), Expect = 0.0
Identities = 616/616 (100%)
Strand = Plus / Plus
Query: 1 atggcttttcctggttccatggaaggttggatgaaagcttcttatgtggtctttgctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 atggcttttcctggttccatggaaggttggatgaaagcttcttatgtggtctttgctttc 151
Query: 61 atctctgctatgttccttggtgtcatgaaagggattgttgtgggtcctattgctgctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atctctgctatgttccttggtgtcatgaaagggattgttgtgggtcctattgctgctctg 211
Query: 121 atactgataattggaaatgttggggtgattctgggaatgtttcctgcacatgtggcttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atactgataattggaaatgttggggtgattctgggaatgtttcctgcacatgtggcttgg 271
Query: 181 acagtatacacccttttgaagattcaaatgtttgatgtggccttgaaagttgcaattttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 acagtatacacccttttgaagattcaaatgtttgatgtggccttgaaagttgcaattttg 331
Query: 241 attgctttaccagccttgtttggtttatggttgcaactaggcatagctggtagcattctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 attgctttaccagccttgtttggtttatggttgcaactaggcatagctggtagcattctt 391
Query: 301 gttggggttggctatggctttttcacacctttggtttcaacttttgaggccttcaggcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gttggggttggctatggctttttcacacctttggtttcaacttttgaggccttcaggcat 451
Query: 361 ggcagtgagtccaagagatttttgcactgtattacagatggaacatggggaacaatcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ggcagtgagtccaagagatttttgcactgtattacagatggaacatggggaacaatcaaa 511
Query: 421 ggctgttgcaccgtagttagggattttgcagatgtgtgttgccattcatacccatgttac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ggctgttgcaccgtagttagggattttgcagatgtgtgttgccattcatacccatgttac 571
Query: 481 ttgagagaactacgtgaatcacctgcttcaaatgagcaaaagaagctgaggttaattcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ttgagagaactacgtgaatcacctgcttcaaatgagcaaaagaagctgaggttaattcat 631
Query: 541 gttcctgcgtgtatcattgttgggataatggggatagttttggagattcctctgttcact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gttcctgcgtgtatcattgttgggataatggggatagttttggagattcctctgttcact 691
Query: 601 gcaattgctatagtaa 616
||||||||||||||||
Sbjct: 692 gcaattgctatagtaa 707
>gnl|LJGI|FS348894 similar to UniRef100_A7PL85 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 610
Score = 815 bits (411), Expect = 0.0
Identities = 414/415 (99%)
Strand = Plus / Minus
Query: 1374 gaaggaacagataagggtaattgaattggtagatgcagaagtgagatacttggaaaaagt 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gaaggaacagataagggtaattgaattggtagatgcagaagtgagatacttggaaaaagt 551
Query: 1434 gattctttttggaagcaataagcaacgcttggacgcttgggataatggtggtttagcgat 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gattctttttggaagcaataagcaacgcttggacgcttgggataatggtggtttagcgat 491
Query: 1494 tacagatactcttagagctgctcaaatcgagggactttccagaaggatgattggaatgac 1553
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tacagatacttttagagctgctcaaatcgagggactttccagaaggatgattggaatgac 431
Query: 1554 aagaagtgtgacaaagcttccaacttacagaaggaaattccgtcatatcgttaaagcctt 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aagaagtgtgacaaagcttccaacttacagaaggaaattccgtcatatcgttaaagcctt 371
Query: 1614 agtttgtcattctgtggagaaagatgtcccaggaggagaggctttagttactcattctct 1673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agtttgtcattctgtggagaaagatgtcccaggaggagaggctttagttactcattctct 311
Query: 1674 gggtatagatatttctgaaaaggccttagttactcattctcattgtatggagaaagatgt 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gggtatagatatttctgaaaaggccttagttactcattctcattgtatggagaaagatgt 251
Query: 1734 ttctggaagatccactaggtctatagtatcatttgcctcagatgacagtgtttaa 1788
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttctggaagatccactaggtctatagtatcatttgcctcagatgacagtgtttaa 196