Miyakogusa Predicted Gene
- Lj0g3v0292089.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0292089.1 tr|Q0Z885|Q0Z885_9LAMI Actin 2 OS=Torenia
fournieri GN=ACT2 PE=3 SV=1,69.35,0,no description,NULL;
ACTIN,Actin-like; Actin-like ATPase domain,NULL; Actin,Actin-like;
SUBFAMILY NO,CUFF.19520.1
(603 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58841 similar to UniRef100_A9TYG6 Cluster: Predicted ... 1156 0.0
gnl|LJGI|TC57673 homologue to UniRef100_A2XLF2 Cluster: Actin-1;... 224 5e-58
gnl|LJGI|DC595094 homologue to UniRef100_Q7XAT4 Cluster: Actin; ... 155 4e-37
gnl|LJGI|FS339153 similar to UniRef100_Q96440 Cluster: Actin; n=... 96 3e-19
gnl|LJGI|TC74167 homologue to UniRef100_A1Y2A0 Cluster: Actin; n... 86 3e-16
gnl|LJGI|TC64655 UniRef100_Q9M729 Cluster: Actin; n=1; Vigna rad... 60 2e-08
gnl|LJGI|TC68282 homologue to UniRef100_Q9SLQ6 Cluster: Actin is... 54 1e-06
gnl|LJGI|TC59799 UniRef100_Q9SLQ6 Cluster: Actin isoform B; n=1;... 54 1e-06
gnl|LJGI|TC80235 UniRef100_A7QGQ2 Cluster: Chromosome chr12 scaf... 52 4e-06
>gnl|LJGI|TC58841 similar to UniRef100_A9TYG6 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(98%)
Length = 1740
Score = 1156 bits (583), Expect = 0.0
Identities = 595/599 (99%)
Strand = Plus / Plus
Query: 1 atggcatactacgatgatattcaacctattgtttttgacaatggatcaggagtgtttaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atggcatactacgatgatattcaacctattgtttttgacaatggatcaggagtgtttaag 127
Query: 61 ggtggacttgtcagatatgacgctccgcatgctgtgtttcccagcatcgtggggcgctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggtggacttgtcagatatgacgctccgcatgctgtgtttcccagcatcgtggggcgctct 187
Query: 121 caacatgcgggtatgatggtgggcataacccgaaaagatgcatatgttggcgatgaggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 caacatgcgggtatgatggtgggcataacccgaaaagatgcatatgttggcgatgaggca 247
Query: 181 gactctagaagtggccttctaactctgaaatacccaatggaacacggagtggtgagcaat 240
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 248 gactctagaagtggccttctaactctgaaatacccaattgaacacggagttgtgagcaat 307
Query: 241 tgggatgacatggaaaagattgggaaccatgccttttataatgaacttcgtgtttcccca 300
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 308 tgggatgacatggaaaagatttggcaccatgccttttataatgaacttcgtgtttcccca 367
Query: 301 gaagagcatcctcttcttctaaccgaggttcccttaaacactaagaataaccgtgagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gaagagcatcctcttcttctaaccgaggttcccttaaacactaagaataaccgtgagaag 427
Query: 361 atgactcaaatcatgtttgagacttttagtacccctgctatgtatatatccaacggtgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atgactcaaatcatgtttgagacttttagtacccctgctatgtatatatccaacggtgct 487
Query: 421 gttctctcaatgtatgcaagtggacgtataaatggtattgtattggagtgtggtgatggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gttctctcaatgtatgcaagtggacgtataaatggtattgtattggagtgtggtgatggt 547
Query: 481 gtgaccagcactgctcctgtttacgagggttatgtcctcccacatgccatccaaagtctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gtgaccagcactgctcctgtttacgagggttatgtcctcccacatgccatccaaagtctt 607
Query: 541 aattttggtggtagcgatatcactaaatacttgatagatattttgggtgaacgtggcta 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aattttggtggtagcgatatcactaaatacttgatagatattttgggtgaacgtggcta 666
>gnl|LJGI|TC57673 homologue to UniRef100_A2XLF2 Cluster: Actin-1; n=2; Oryza
sativa|Rep: Actin-1 - Oryza sativa subsp. indica (Rice),
complete
Length = 1610
Score = 224 bits (113), Expect = 5e-58
Identities = 416/517 (80%)
Strand = Plus / Plus
Query: 16 gatattcaacctattgtttttgacaatggatcaggagtgtttaagggtggacttgtcaga 75
||||||||||| |||| | |||||||||| ||||| || |||||| |||| ||| ||
Sbjct: 130 gatattcaaccccttgtgtgtgacaatggaacaggaatggttaaggctggatttgctgga 189
Query: 76 tatgacgctccgcatgctgtgtttcccagcatcgtggggcgctctcaacatgcgggtatg 135
|||| || || | |||||||||||||||||| || || || ||| || | ||| ||
Sbjct: 190 gatgatgccccacgtgctgtgtttcccagcattgtaggtcgtcctcgtcacactggtgtg 249
Query: 136 atggtgggcataacccgaaaagatgcatatgttggcgatgaggcagactctagaagtggc 195
||||| ||||| || ||||||||||||||||| ||||||||| | |||| ||||
Sbjct: 250 atggttggcatgggccagaaagatgcatatgttggtgatgaggcacagtctaagcgtggt 309
Query: 196 cttctaactctgaaatacccaatggaacacggagtggtgagcaattgggatgacatggaa 255
|| | || || || |||||||| ||||| ||| | ||||||||||||||||| ||||||
Sbjct: 310 attttgaccctcaagtacccaattgaacatggaattgtgagcaattgggatgatatggaa 369
Query: 256 aagattgggaaccatgccttttataatgaacttcgtgtttccccagaagagcatcctctt 315
|||||| || | ||| |||| |||||||| ||||||||| |||||||||||||||| ||
Sbjct: 370 aagatttggcatcataccttctataatgagcttcgtgttgccccagaagagcatccagtt 429
Query: 316 cttctaaccgaggttcccttaaacactaagaataaccgtgagaagatgactcaaatcatg 375
|| ||||| |||| ||| | ||| ||||| |||||||||||||||||| |||||||||
Sbjct: 430 ctgctaactgaggctcctcttaaccctaaggctaaccgtgagaagatgacccaaatcatg 489
Query: 376 tttgagacttttagtacccctgctatgtatatatccaacggtgctgttctctcaatgtat 435
|| |||||||||| |||||| ||||||||| || ||| |||||||| ||| | |||
Sbjct: 490 ttcgagacttttaatacccccgctatgtatgtagccattcaggctgttctttcactttat 549
Query: 436 gcaagtggacgtataaatggtattgtattggagtgtggtgatggtgtgaccagcactgct 495
|||||||| |||| || ||||||||||||||| | |||||||||||| | | |||||
Sbjct: 550 gcaagtgggcgtacaactggtattgtattggattctggtgatggtgtcagccacactgtc 609
Query: 496 cctgtttacgagggttatgtcctcccacatgccatcc 532
|| |||| |||||||||| ||| || ||||||||||
Sbjct: 610 cccatttatgagggttatgcccttccgcatgccatcc 646
>gnl|LJGI|DC595094 homologue to UniRef100_Q7XAT4 Cluster: Actin; n=1; Phaseolus
acutifolius|Rep: Actin - Phaseolus acutifolius (Tepary
bean), partial (50%)
Length = 450
Score = 155 bits (78), Expect = 4e-37
Identities = 261/322 (81%)
Strand = Plus / Plus
Query: 211 tacccaatggaacacggagtggtgagcaattgggatgacatggaaaagattgggaaccat 270
|||||||| ||||| ||| | ||||||||||||||||| |||||||||||| || | |||
Sbjct: 34 tacccaattgaacatggaattgtgagcaattgggatgatatggaaaagatttggcatcat 93
Query: 271 gccttttataatgaacttcgtgtttccccagaagagcatcctcttcttctaaccgaggtt 330
|||| |||||||| ||||||||| ||||| |||||||| ||||| |||| |
Sbjct: 94 accttctataatgagcttcgtgttgccccaaaagagcatgggggggggctaactgaggct 153
Query: 331 cccttaaacactaagaataaccgtgagaagatgactcaaatcatgtttgagacttttagt 390
|| | ||| ||||| |||||||||||||||||| ||||||||||| |||||||||| |
Sbjct: 154 cctcttaaccctaaggctaaccgtgagaagatgacccaaatcatgttcgagacttttaat 213
Query: 391 acccctgctatgtatatatccaacggtgctgttctctcaatgtatgcaagtggacgtata 450
||||| ||||||||| || ||| |||||||| ||| | ||||||||||| |||| |
Sbjct: 214 acccccgctatgtatgtagccattcaggctgttctttcactttatgcaagtgggcgtaca 273
Query: 451 aatggtattgtattggagtgtggtgatggtgtgaccagcactgctcctgtttacgagggt 510
| ||||||||||||||| | |||||||||||| | | ||||| || |||| ||||||
Sbjct: 274 actggtattgtattggattctggtgatggtgtcagccacactgtccccatttatgagggt 333
Query: 511 tatgtcctcccacatgccatcc 532
|||| ||| || ||||||||||
Sbjct: 334 tatgcccttccgcatgccatcc 355
>gnl|LJGI|FS339153 similar to UniRef100_Q96440 Cluster: Actin; n=1; Glycine max|Rep:
Actin - Glycine max (Soybean), partial (57%)
Length = 778
Score = 95.6 bits (48), Expect = 3e-19
Identities = 141/172 (81%)
Strand = Plus / Plus
Query: 237 caattgggatgacatggaaaagattgggaaccatgccttttataatgaacttcgtgtttc 296
|||||||||||| |||||||||||| ||| ||| | || ||||||| || ||||||
Sbjct: 258 caattgggatgatatggaaaagatttggaggcatacattcgataatgagctccgtgttga 317
Query: 297 cccagaagagcatcctcttcttctaaccgaggttcccttaaacactaagaataaccgtga 356
||||||||| ||||| |||| ||||||||| ||| || ||| ||| |||||||||
Sbjct: 318 cccagaagaccatccggttctgctaaccgagactccttttaacctcaaggctaaccgtga 377
Query: 357 gaagatgactcaaatcatgtttgagacttttagtacccctgctatgtatata 408
||||||| | |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 378 gaagatggcccaaatcatgtttgagacttttaagaccccttttatgtatata 429
>gnl|LJGI|TC74167 homologue to UniRef100_A1Y2A0 Cluster: Actin; n=1; Aegiceras
corniculatum|Rep: Actin - Aegiceras corniculatum,
partial (81%)
Length = 762
Score = 85.7 bits (43), Expect = 3e-16
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 352 cgtgagaagatgactcaaatcatgtttgagacttttagtacccctgctatgtatatatcc 411
|||||||||||||| || ||||||||||||||||| | | |||||||||||||| || ||
Sbjct: 405 cgtgagaagatgacccagatcatgtttgagactttcaatgcccctgctatgtatgtagcc 464
Query: 412 aacggtgctgttctctcaatgtatgcaagtggacgtataaatggtattgtattggagtgt 471
| |||||||| ||| ||||||| ||||| |||| | ||||||||| ||||| | |
Sbjct: 465 attcaggctgttctttcactgtatgccagtggtcgtactactggtattgtgttggattct 524
Query: 472 ggtgatggtgt 482
|||||||||||
Sbjct: 525 ggtgatggtgt 535
>gnl|LJGI|TC64655 UniRef100_Q9M729 Cluster: Actin; n=1; Vigna radiata var.
radiata|Rep: Actin - Phaseolus aureus (Mung bean) (Vigna
radiata), complete
Length = 1492
Score = 60.0 bits (30), Expect = 2e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 352 cgtgagaagatgactcaaatcatgtttgagacttttagtacccctgctatgtat 405
|||||||| ||||| || |||||||||||||| || | ||||||||||||||||
Sbjct: 453 cgtgagaaaatgacacagatcatgtttgagaccttcaatacccctgctatgtat 506
>gnl|LJGI|TC68282 homologue to UniRef100_Q9SLQ6 Cluster: Actin isoform B; n=1; Mimosa
pudica|Rep: Actin isoform B - Mimosa pudica (Sensitive
plant), complete
Length = 1670
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 418 gctgttctctcaatgtatgcaagtggacgtataaatggtattgtattggagtgtggtgat 477
||||| ||||| ||||||||||||| |||| || ||||||||| ||||| | ||||||
Sbjct: 587 gctgtcctctccctgtatgcaagtggtcgtacaactggtattgttttggattccggtgat 646
Query: 478 ggtgtga 484
|||||||
Sbjct: 647 ggtgtga 653
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 358 aagatgactcaaatcatgtttgagac 383
||||||||||||||||||||||||||
Sbjct: 527 aagatgactcaaatcatgtttgagac 552
>gnl|LJGI|TC59799 UniRef100_Q9SLQ6 Cluster: Actin isoform B; n=1; Mimosa pudica|Rep:
Actin isoform B - Mimosa pudica (Sensitive plant),
partial (57%)
Length = 761
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 418 gctgttctctcaatgtatgcaagtggacgtataaatggtattgtattggagtgtggtgat 477
||||| ||||| ||||||||||||| |||| || ||||||||| ||||| | ||||||
Sbjct: 533 gctgtcctctccctgtatgcaagtggtcgtacaactggtattgttttggattccggtgat 592
Query: 478 ggtgtga 484
|||||||
Sbjct: 593 ggtgtga 599
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 358 aagatgactcaaatcatgtttgagac 383
||||||||||||||||||||||||||
Sbjct: 473 aagatgactcaaatcatgtttgagac 498
>gnl|LJGI|TC80235 UniRef100_A7QGQ2 Cluster: Chromosome chr12 scaffold_93, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 699
Score = 52.0 bits (26), Expect = 4e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 352 cgtgagaagatgactcaaatcatgtttgagacttttagtacccctgctatgtat 405
|||||||| ||||| ||||||||||||||||| || | || ||||||||||||
Sbjct: 432 cgtgagaaaatgacccaaatcatgtttgagacattcaacacacctgctatgtat 485