Miyakogusa Predicted Gene

Lj0g3v0291659.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0291659.1 Non Chatacterized Hit- tr|K4BX66|K4BX66_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,72.58,1e-18,DUF789,Protein of unknown function DUF789;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.19494.1
         (189 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73529 weakly similar to UniRef100_A7PGX7 Cluster: Chr...   127   3e-29
gnl|LJGI|TC73293 similar to UniRef100_A7P3D4 Cluster: Chromosome...   111   2e-24

>gnl|LJGI|TC73529 weakly similar to UniRef100_A7PGX7 Cluster: Chromosome chr17
            scaffold_16, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (68%)
          Length = 1976

 Score =  127 bits (64), Expect = 3e-29
 Identities = 124/144 (86%)
 Strand = Plus / Plus

                                                                        
Query: 11   tccctaaaatgtccttacctgtttttggtcttgcttcctacaaattcaaaggatctctgt 70
            ||||||||||| | || |||| ||||||||||||||| ||||| ||||||||| |||| |
Sbjct: 1228 tccctaaaatgcctttgcctgcttttggtcttgcttcatacaagttcaaaggacctctat 1287

                                                                        
Query: 71   ggactcctaatggcggatacgagcgccaactagctatctctcttgttcaggctgctgaca 130
            ||||||| ||||| ||||||||||||||| |||| | ||||||| | ||||||||||| |
Sbjct: 1288 ggactcccaatggtggatacgagcgccaattagccagctctcttttacaggctgctgaaa 1347

                                    
Query: 131  gttggttaagattgcttcaggtca 154
              |||||||||  |||||||||||
Sbjct: 1348 actggttaagaccgcttcaggtca 1371


>gnl|LJGI|TC73293 similar to UniRef100_A7P3D4 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 569

 Score =  111 bits (56), Expect = 2e-24
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                   
Query: 114 tgttcaggctgctgacagttggttaagattgcttcaggtcaatcacccggacttcc 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgttcaggctgctgacagttggttaagattgcttcaggtcaatcacccggacttcc 56