Miyakogusa Predicted Gene

Lj0g3v0291129.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0291129.1 Non Chatacterized Hit- tr|G7L8R7|G7L8R7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,53.77,0.000000000000002,seg,NULL,CUFF.19462.1
         (299 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62883 UniRef100_Q567D6 Cluster: Rbm39b protein; n=1; ...   381   e-105

>gnl|LJGI|TC62883 UniRef100_Q567D6 Cluster: Rbm39b protein; n=1; Danio rerio|Rep:
           Rbm39b protein - Danio rerio (Zebrafish) (Brachydanio
           rerio), partial (9%)
          Length = 764

 Score =  381 bits (192), Expect = e-105
 Identities = 192/192 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgttgaacagcatggtggttgtgacggtggcgcgtgtgtcatcggaagcatggcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82  atggtgttgaacagcatggtggttgtgacggtggcgcgtgtgtcatcggaagcatggcaa 141

                                                                       
Query: 61  tggctgacttgcattgaggagcctctgagcagtgagcagctcttcgatctgctctgcacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 tggctgacttgcattgaggagcctctgagcagtgagcagctcttcgatctgctctgcacc 201

                                                                       
Query: 121 ttccctttccatcaacttggtcgcatcgctctctgcttctgctccttcttctgcctccct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttccctttccatcaacttggtcgcatcgctctctgcttctgctccttcttctgcctccct 261

                       
Query: 181 caagctcatcct 192
           ||||||||||||
Sbjct: 262 caagctcatcct 273



 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 252 caacctcaattttgatgatttctattaccattcccattccgattgact 299
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 caacctcaattttgatgatttctattaccattcccattccgattgact 380