Miyakogusa Predicted Gene

Lj0g3v0290919.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0290919.1 tr|A9TIP4|A9TIP4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_93266
,34.3,3e-16,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
BTB,BTB/POZ; no description,BTB/POZ fold; BTB,BTB/P,CUFF.19442.1
         (527 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72041 similar to UniRef100_A7NVE2 Cluster: Chromosome...   722   0.0  
gnl|LJGI|TC75412 similar to UniRef100_A7NVE2 Cluster: Chromosome...   262   2e-69
gnl|LJGI|GO015310 similar to UniRef100_A7NVE2 Cluster: Chromosom...    60   1e-08

>gnl|LJGI|TC72041 similar to UniRef100_A7NVE2 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (38%)
          Length = 620

 Score =  722 bits (364), Expect = 0.0
 Identities = 382/388 (98%)
 Strand = Plus / Plus

                                                                       
Query: 140 aagagacctctacaatccacatggaagacatgtcacaacaatcctgcaaggcccttctga 199
           ||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1   aagagacctctacgatccacatggaagacatgtcacgacgatcctgcaaggcccttctga 60

                                                                       
Query: 200 gctacttgtacggcacaataaaacatgaagatttctggaagcacaggcttgcgttgctcg 259
           ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61  gctacttgtacggcacaatcaaacatgcagatttctggaagcacaggcttgcgttgctcg 120

                                                                       
Query: 260 gagcagccaataaattcgaaattggtgatctcaaagatgcttgtgaggaaagcctgctgg 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcagccaataaattcgaaattggtgatctcaaagatgcttgtgaggaaagcctgctgg 180

                                                                       
Query: 320 atgatcttacctcaggaaatgttctcagcaggctaaatgaggcttggctgtaccagttgc 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgatcttacctcaggaaatgttctcagcaggctaaatgaggcttggctgtaccagttgc 240

                                                                       
Query: 380 ccaagttaaagaaaggatgtttcacattcttatttgactttggcaagatatatgatgtta 439
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccagttaaagaaaggatgtttcacattcttatttgactttggcaagatatatgatgtta 300

                                                                       
Query: 440 gagaggaaataaacaacttttttctccttgcggagagggagctgatgatggagatgtttc 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagaggaaataaacaacttttttctccttgcggagagggagctgatgatggagatgtttc 360

                                       
Query: 500 aggaagtgcttactgtttggaaatagtt 527
           ||||||||||||||||||||||||||||
Sbjct: 361 aggaagtgcttactgtttggaaatagtt 388


>gnl|LJGI|TC75412 similar to UniRef100_A7NVE2 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (57%)
          Length = 652

 Score =  262 bits (132), Expect = 2e-69
 Identities = 139/140 (99%), Gaps = 1/140 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcttgacgaggaaatacacgctgacctcaccattgtcaccgcagatggtacactgaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 atgcttgacgaggaaatacacgctgacctcaccattgtcaccgcagatggtacactgaga 570

                                                                       
Query: 61  gcccataaggcagttttgtctgcaagctcccctgtgtttgagggcttgtatcatcatcaa 120
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gcccataag-cagttttgtctgcaagctcccctgtgtttgagggcttgtatcatcatcaa 629

                               
Query: 121 gacgtcgttgatgatgaaaa 140
           ||||||||||||||||||||
Sbjct: 630 gacgtcgttgatgatgaaaa 649


>gnl|LJGI|GO015310 similar to UniRef100_A7NVE2 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 661

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 116/142 (81%), Gaps = 2/142 (1%)
 Strand = Plus / Minus

                                                                       
Query: 300 ttgtgaggaaagcctgctggatgatcttacctcaggaaatgttc-tcagcaggctaaatg 358
           ||||||||||||||| || || ||||||| |||||||||||||| |||| | ||||| ||
Sbjct: 614 ttgtgaggaaagccttcttgaagatcttaactcaggaaatgttcttcag-atgctaagtg 556

                                                                       
Query: 359 aggcttggctgtaccagttgcccaagttaaagaaaggatgtttcacattcttatttgact 418
           |||||||| | || || || |  |||||||||||||  ||| |    ||||| ||||| |
Sbjct: 555 aggcttggttttatcaattacataagttaaagaaagagtgtatggtgttcttgtttgaat 496

                                 
Query: 419 ttggcaagatatatgatgttag 440
           |||| || ||||||||||||||
Sbjct: 495 ttggtaaaatatatgatgttag 474