Miyakogusa Predicted Gene

Lj0g3v0290869.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0290869.2 Non Chatacterized Hit- tr|A9PHV4|A9PHV4_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,52.81,0.00000000006, ,CUFF.19438.2
         (276 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71852 similar to UniRef100_P29828 Cluster: Protein di...   143   6e-34
gnl|LJGI|GO016766 similar to UniRef100_P29828 Cluster: Protein d...   115   1e-25
gnl|LJGI|BP037707 similar to UniRef100_P29828 Cluster: Protein d...    52   2e-06

>gnl|LJGI|TC71852 similar to UniRef100_P29828 Cluster: Protein disulfide-isomerase
            precursor; n=1; Medicago sativa|Rep: Protein
            disulfide-isomerase precursor - Medicago sativa
            (Alfalfa), partial (89%)
          Length = 1875

 Score =  143 bits (72), Expect = 6e-34
 Identities = 156/184 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgctccttggtgtggtcattgcaaaaagttggctccaatattggaggaagttgctgttt 60
            ||||||||||||||||||| ||||| |   ||||||||||| |||| ||||||||||| |
Sbjct: 1275 atgctccttggtgtggtcactgcaagagtctggctccaatactggatgaagttgctgtct 1334

                                                                        
Query: 61   catatcaaagtaatcctgatgttcttatcgcaaagctggatgcaactgccaatgatatcc 120
            ||||||||| | || ||||| || |||| |||||  | || ||||||||||||||| |||
Sbjct: 1335 catatcaaaatgatgctgatattgttattgcaaaatttgacgcaactgccaatgatgtcc 1394

                                                                        
Query: 121  caagcgagacctttgatgtacaaggttatccaactctgtacttcaagtcagcaagtggaa 180
            |||  || | |||||| || |||||||||||||||||||||||||  ||| |||||||||
Sbjct: 1395 caactgaaagctttgaagtccaaggttatccaactctgtacttcatttcatcaagtggaa 1454

                
Query: 181  aaat 184
            ||||
Sbjct: 1455 aaat 1458


>gnl|LJGI|GO016766 similar to UniRef100_P29828 Cluster: Protein disulfide-isomerase
           precursor; n=1; Medicago sativa|Rep: Protein
           disulfide-isomerase precursor - Medicago sativa
           (Alfalfa), partial (14%)
          Length = 937

 Score =  115 bits (58), Expect = 1e-25
 Identities = 130/154 (84%)
 Strand = Plus / Minus

                                                                       
Query: 31  tggctccaatattggaggaagttgctgtttcatatcaaagtaatcctgatgttcttatcg 90
           ||||||||||| |||| ||||||||||| |||||||||| | || ||||| || |||| |
Sbjct: 486 tggctccaatactggatgaagttgctgtctcatatcaaaatgatgctgatattgttattg 427

                                                                       
Query: 91  caaagctggatgcaactgccaatgatatcccaagcgagacctttgatgtacaaggttatc 150
           ||||  | || ||||||||||||||| ||||||  || | |||||| || ||||||||||
Sbjct: 426 caaaatttgacgcaactgccaatgatgtcccaactgaaagctttgaagtccaaggttatc 367

                                             
Query: 151 caactctgtacttcaagtcagcaagtggaaaaat 184
           |||||||||||||||  |||  ||||||||||||
Sbjct: 366 caactctgtacttcatttcattaagtggaaaaat 333


>gnl|LJGI|BP037707 similar to UniRef100_P29828 Cluster: Protein disulfide-isomerase
           precursor; n=1; Medicago sativa|Rep: Protein
           disulfide-isomerase precursor - Medicago sativa
           (Alfalfa), partial (19%)
          Length = 465

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgctccttggtgtggtcattgcaaaaagttggctccaatattggaggaagttgctgttt 60
           ||||||||||||||||||| ||| | |   ||||||| ||| |||| ||||||||||| |
Sbjct: 260 atgctccttggtgtggtcactgccagagtctggctcccatactggatgaagttgctgtct 201

                 
Query: 61  catatc 66
           ||||||
Sbjct: 200 catatc 195