Miyakogusa Predicted Gene

Lj0g3v0290509.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0290509.1 tr|E5GBE5|E5GBE5_CUCME Nucleotide binding protein
OS=Cucumis melo subsp. melo PE=4 SV=1,26,2e-18,no
description,WD40/YVTN repeat-like-containing domain; WD40
repeat-like,WD40-repeat-containing doma,CUFF.19429.1
         (1368 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593169 similar to UniRef100_A7QWN1 Cluster: Chromosom...   100   4e-20

>gnl|LJGI|DC593169 similar to UniRef100_A7QWN1 Cluster: Chromosome chr4 scaffold_205,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_205, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 581

 Score = 99.6 bits (50), Expect = 4e-20
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                       
Query: 24  ttcaaagttgttgcaggttgtgttgctgaatgagcatacagaatctcgcacaattaagtt 83
           |||||| ||||||||||| |||||| ||||||| || |  ||||||||||||||||||||
Sbjct: 418 ttcaaacttgttgcaggtagtgttgttgaatgaacacattgaatctcgcacaattaagtt 477

                                                         
Query: 84  gggacttcatttatctgaatcttgtattgacatggagatcatatca 129
           ||| |||  ||| | |||||  ||||||||||||||||||||||||
Sbjct: 478 ggggcttagtttgtttgaatgctgtattgacatggagatcatatca 523