Miyakogusa Predicted Gene

Lj0g3v0290499.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0290499.1 Non Chatacterized Hit- tr|A5BTB8|A5BTB8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.07,2e-19,seg,NULL; CHD5,CHD5-like protein;
coiled-coil,NULL,CUFF.19418.1
         (525 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73345 weakly similar to UniRef100_A7QWN5 Cluster: Chr...  1033   0.0  

>gnl|LJGI|TC73345 weakly similar to UniRef100_A7QWN5 Cluster: Chromosome chr4
           scaffold_205, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_205, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (77%)
          Length = 748

 Score = 1033 bits (521), Expect = 0.0
 Identities = 524/525 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggagatggagcaagcgaagggcatcaaaggtcgttagcagctcctctgatatttttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  atgggagatggagcaagcgaagggcatcaaaggtcgttagcagctcctctgatatttttc 157

                                                                       
Query: 61  gttgttatcgcttttcaatttgcttcccattggattgatcaattcaagaagagtggagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gttgttatcgcttttcaatttgcttcccattggattgatcaattcaagaagagtggagat 217

                                                                       
Query: 121 aatggaaaagaaattcagttgcgtggagaaataaaacaacttttgaaggaggcaaactca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aatggaaaagaaattcagttgcgtggagaaataaaacaacttttgaaggaggcaaactca 277

                                                                       
Query: 181 ctgtcacagccatcaacctacgcacaagcagcaaaacttaaaagacaagcagctgcgaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctgtcacagccatcaacctacgcacaagcagcaaaacttaaaagacaagcagctgcgaag 337

                                                                       
Query: 241 gagagggaacttgcaaaatgtcacaatttacatgataaggatacagctttgtattcaaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gagagggaacttgcaaaatgtcacaatttacatgataaggatacagctttgtattcaaac 397

                                                                       
Query: 301 gttctgctcgtctcaaaggttttaacatatttaattctgctcatctggttttggagtgct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gttctgctcgtctcaaaggttttaacatatttaattctgctcatctggttttggagtgct 457

                                                                       
Query: 361 cctgtggctagcatatctcaacaacttgtgcaaccattcgggagattattatcttggagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cctgtggctagcatatctcaacaacttgtgcaaccattcgggagattattatcttggagg 517

                                                                       
Query: 421 actggaggggttcaaaataacaatattatggttggaataataccttggctagtagtttgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 actggaggggttcaaaataacaatattatggttggaataataccttggctagtagtttgt 577

                                                        
Query: 481 tccagggttagcagatttatttgtagactcacctatggcaaatag 525
           | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tgcagggttagcagatttatttgtagactcacctatggcaaatag 622