Miyakogusa Predicted Gene

Lj0g3v0290399.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0290399.1 tr|C1JXM3|C1JXM3_LIZAU RAD1-like protein OS=Liza
aurata GN=rad1 PE=2 SV=1,26.97,3e-18,no description,NULL; CELL CYCLE
CHECKPOINT PROTEIN RAD1,Rad1/Rec1/Rad17; Rad1,Rad1/Rec1/Rad17; DNA
c,CUFF.19397.1
         (909 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61443 similar to UniRef100_A7PC53 Cluster: Chromosome...  1794   0.0  

>gnl|LJGI|TC61443 similar to UniRef100_A7PC53 Cluster: Chromosome chr2 scaffold_11,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_11, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (96%)
          Length = 1315

 Score = 1794 bits (905), Expect = 0.0
 Identities = 908/909 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgagcttctccggcatggaggaggaggacgaagccccagacgtcttgtgccacctcgaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119  atgagcttctccggcatggaggaggaggacgaagccccagacgtcttgtgccacctcgaa 178

                                                                        
Query: 61   aacgttcaaggcttagtcgacgccctcaccgccgttcgatggaagcgccaccaggacgcg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179  aacgttcaaggcttagtcgacgccctcaccgccgttcgatggaagcgccaccaggacgcg 238

                                                                        
Query: 121  gttttagaactgtccgaacacggcattgtcttgatcgttgaagaaagcggttgcctccaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239  gttttagaactgtccgaacacggcattgtcttgatcgttgaagaaagcggttgcctccaa 298

                                                                        
Query: 181  gccaaggtttatctcaaacgagagcttttcattcgctatgattacaacgcacaagcacga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299  gccaaggtttatctcaaacgagagcttttcattcgctatgattacaacgcacaagcacga 358

                                                                        
Query: 241  cctcgtttcggggtgagtttggggctttttgtggattgcttgaatgctttctcggttcat 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359  cctcgtttcggggtgagtttggggctttttgtggattgcttgaatgctttctcggttcat 418

                                                                        
Query: 301  ggccactccagtgtgattcagattcaatatccaggtcctgacatgcaggttcttctcaaa 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419  ggccactccagtgtgattcagattcaatatccaggtcctgacatgcaggttcttctcaaa 478

                                                                        
Query: 361  tctgtagattcgccggatgccagtatttgtgcagagatcagaacaaggattcctgataca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479  tctgtagattcgccggatgccagtatttgtgcagagatcagaacaaggattcctgataca 538

                                                                        
Query: 421  gttgcgtgggactacaattttgaacctgctgggacaaaccctttaaccttcactgttaag 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539  gttgcgtgggactacaattttgaacctgctgggacaaaccctttaaccttcactgttaag 598

                                                                        
Query: 481  tctgcagctctaaaggaagctattgaggatcttgaatggcctggatcaagcatacagata 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599  tctgcagctctaaaggaagctattgaggatcttgaatggcctggatcaagcatacagata 658

                                                                        
Query: 541  attctagagcccgatcctccttctgtcacaatgagagctgaaggacatggagacttgcag 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659  attctagagcccgatcctccttctgtcacaatgagagctgaaggacatggagacttgcag 718

                                                                        
Query: 601  atagacttcatgtattatgtgaattccgatctcttggcagcatttcagtgtgacaatcac 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719  atagacttcatgtattatgtgaattccgatctcttggcagcatttcagtgtgacaatcac 778

                                                                        
Query: 661  acttctttcaagtacaaatataagttcctcagagcaacaacttctaatatacctaacagt 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779  acttctttcaagtacaaatataagttcctcagagcaacaacttctaatatacctaacagt 838

                                                                        
Query: 721  gttattaaagaaaacagaggaagcaagttaagcattgggagaggaggaatgttaaaagtt 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839  gttattaaagaaaacagaggaagcaagttaagcattgggagaggaggaatgttaaaagtt 898

                                                                        
Query: 781  cagcatctggtttcaattgccaaaccatccgcctcacacacacatgtcgattctgcaggc 840
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 899  cagcatctggtttcaattgccaaaccatccgcctcacacacacatgtcgattttgcaggc 958

                                                                        
Query: 841  tatcaacaaccaggtcgaatagctcatattgaattctttctgaaaccagaggaaagtgag 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959  tatcaacaaccaggtcgaatagctcatattgaattctttctgaaaccagaggaaagtgag 1018

                     
Query: 901  gactaaacg 909
            |||||||||
Sbjct: 1019 gactaaacg 1027