Miyakogusa Predicted Gene

Lj0g3v0289679.4
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0289679.4 Non Chatacterized Hit- tr|C5Y4B4|C5Y4B4_SORBI
Putative uncharacterized protein Sb05g021440
OS=Sorghu,41.58,0.00000000000001,Transpos_assoc,NULL,CUFF.19353.4
         (271 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS344145 homologue to UniRef100_A5D257 Cluster: Unchara...   521   e-148

>gnl|LJGI|FS344145 homologue to UniRef100_A5D257 Cluster: Uncharacterized conserved
           protein; n=1; Pelotomaculum thermopropionicum SI|Rep:
           Uncharacterized conserved protein - Pelotomaculum
           thermopropionicum (strain DSM 13744 / JCM 10971 / SI),
           partial (6%)
          Length = 647

 Score =  521 bits (263), Expect = e-148
 Identities = 269/271 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaggacaaagagtggaccaaacttccaaggttttgtccagagtatatcatgggcgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atgaaggacaaagagtggaccaaacttccaaggttttgtccagagtatatcatgggcgtt 352

                                                                       
Query: 61  cgtcgatttttagactttgtctacactaaaggaagacctcaaggagatgagattttatgt 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cgtcgatttttagactttgcctacactaaaggaagacctcaaggagatgagattttatgt 412

                                                                       
Query: 121 ccttgtgccaagtgtagaaatcactgttggacaaaaagaaatgtgatattggatcatttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ccttgtgccaagtgtagaaatcactgttggacaaaaagaaatgtgatattggatcatttg 472

                                                                       
Query: 181 gtagctaacggctttctaaagggatatgatgtttgggtccaccatggggagcaaatagaa 240
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gtagctaacgactttctaaagggatatgatgtttgggtccaccatggggagcaaatagaa 532

                                          
Query: 241 aggccaatggaagttgatgatattattgcag 271
           |||||||||||||||||||||||||||||||
Sbjct: 533 aggccaatggaagttgatgatattattgcag 563