Miyakogusa Predicted Gene

Lj0g3v0288979.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0288979.1 Non Chatacterized Hit- tr|I1K3I1|I1K3I1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,96.15,0,FAMILY NOT
NAMED,NULL,CUFF.19328.1
         (321 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV410062 homologue to UniRef100_A7Q186 Cluster: Chromos...   220   4e-57
gnl|LJGI|TC61640 similar to UniRef100_A7PTN8 Cluster: Chromosome...   113   7e-25
gnl|LJGI|TC82003 similar to UniRef100_A3F771 Cluster: Auxin resp...    58   3e-08
gnl|LJGI|TC66053 homologue to UniRef100_A7PHQ5 Cluster: Chromoso...    52   2e-06

>gnl|LJGI|AV410062 homologue to UniRef100_A7Q186 Cluster: Chromosome chr10
           scaffold_43, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 435

 Score =  220 bits (111), Expect = 4e-57
 Identities = 192/219 (87%)
 Strand = Plus / Plus

                                                                       
Query: 94  cttgtttctttaccagctgtaggaagccgcgtagtctactttccacaaggtcacagtgaa 153
           ||||| ||||| |||||  | ||||||||||| || ||||||||||||||||||||||||
Sbjct: 3   cttgtctctttgccagcacttggaagccgcgtggtgtactttccacaaggtcacagtgaa 62

                                                                       
Query: 154 caggttgctgtatctaccaacagggaagtggatgctcacatccccaactatccaagttta 213
           ||||| ||||| || || |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 63  caggtagctgtgtcaactaacaaggaagtggatgctcatattccaaactatccaagctta 122

                                                                       
Query: 214 cctccccaacttatctgtcaacttcataatgtgactatgcatgcagatactgagacagac 273
           ||||| ||||| || ||||||||||||||||||||||||||||| ||| ||||||| || 
Sbjct: 123 cctcctcaactgatttgtcaacttcataatgtgactatgcatgctgatgctgagactgat 182

                                                  
Query: 274 gaagtatacgtgcagatgaccttgcaacctctgaatcct 312
           ||||| || |  |||||||||||||||||||||||||||
Sbjct: 183 gaagtttatgctcagatgaccttgcaacctctgaatcct 221


>gnl|LJGI|TC61640 similar to UniRef100_A7PTN8 Cluster: Chromosome undetermined
           scaffold_30, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_30, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (22%)
          Length = 730

 Score =  113 bits (57), Expect = 7e-25
 Identities = 177/217 (81%)
 Strand = Plus / Plus

                                                                       
Query: 62  attcagaactttggcatgcttgtgctggtcctcttgtttctttaccagctgtaggaagcc 121
           |||| |||||||||||||| |||||||| ||||| |||||  | ||  |  | |||||||
Sbjct: 480 attctgaactttggcatgcatgtgctggccctctggtttccctgcctcccattggaagcc 539

                                                                       
Query: 122 gcgtagtctactttccacaaggtcacagtgaacaggttgctgtatctaccaacagggaag 181
           | |||||||||||||| |||||||||||||| ||||||||||  || || ||||||||||
Sbjct: 540 gtgtagtctactttccccaaggtcacagtgagcaggttgctgcttcaactaacagggaag 599

                                                                       
Query: 182 tggatgctcacatccccaactatccaagtttacctccccaacttatctgtcaacttcata 241
           | ||||| || || || || || || |  || || || || ||||||||||||||||| |
Sbjct: 600 tagatgcacatattcctaattaccccaacttgccgccacagcttatctgtcaacttcaca 659

                                                
Query: 242 atgtgactatgcatgcagatactgagacagacgaagt 278
           |||  || |||||||||||| |||| ||||| |||||
Sbjct: 660 atgaaacaatgcatgcagatgctgaaacagatgaagt 696


>gnl|LJGI|TC82003 similar to UniRef100_A3F771 Cluster: Auxin response factor 8; n=1;
           Ipomoea nil|Rep: Auxin response factor 8 - Ipomoea nil
           (Japanese morning glory) (Pharbitis nil), partial (4%)
          Length = 1468

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 80/97 (82%)
 Strand = Plus / Plus

                                                                       
Query: 62  attcagaactttggcatgcttgtgctggtcctcttgtttctttaccagctgtaggaagcc 121
           |||| |||||||||| ||| |||||||| ||||| |||||| | ||  |||| |||||  
Sbjct: 513 attctgaactttggcctgcatgtgctggccctctggtttctctgcctcctgttggaagtg 572

                                                
Query: 122 gcgtagtctactttccacaaggtcacagtgaacaggt 158
           | |||||||||||||| |||  ||||||||| |||||
Sbjct: 573 gtgtagtctactttccccaatatcacagtgagcaggt 609


>gnl|LJGI|TC66053 homologue to UniRef100_A7PHQ5 Cluster: Chromosome chr17
           scaffold_16, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (31%)
          Length = 1177

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 73  tggcatgcttgtgctggtcctcttgt 98
           ||||||||||||||||||||||||||
Sbjct: 390 tggcatgcttgtgctggtcctcttgt 415