Miyakogusa Predicted Gene

Lj0g3v0288769.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0288769.1 Non Chatacterized Hit- tr|I1PSZ4|I1PSZ4_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,64.77,8e-19,
,CUFF.19366.1
         (456 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66338 similar to UniRef100_A7QRK6 Cluster: Chromosome...   896   0.0  

>gnl|LJGI|TC66338 similar to UniRef100_A7QRK6 Cluster: Chromosome undetermined
           scaffold_151, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_151,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (45%)
          Length = 690

 Score =  896 bits (452), Expect = 0.0
 Identities = 455/456 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaatcgacgcgcgaacgtttcactcttcaactcattcttcagaatcggacactctgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  atgaatcgacgcgcgaacgtttcactcttcaactcattcttcagaatcggacactctgtt 131

                                                                       
Query: 61  cgccaatctccaatacccacttcactgattcccttcacatcatcgactcacatcatcccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cgccaatctccaatacccacttcactgattcccttcacatcatcgactcacatcatcccc 191

                                                                       
Query: 121 gcttcaaatttccactctatatccaaattcgcgattatgcacaatctgagaagtttctgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gcttcaaatttccactctatatccaaattcgcgattatgcacaatctgagaagtttctgt 251

                                                                       
Query: 181 ggtgggtcgagcgaggttgatcagaacaaagaggtggacaccatcaacctcaagtttgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggtgggtcgagcgaggttgatcagaacaaagaggtggacaccatcaacctcaagtttgta 311

                                                                       
Query: 241 gaagcgagggaagagatagatatggccttggagtccaaagagactgtgtatttcaatgaa 300
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 312 gaagcgagggaagagatagatatggccttggagtccaaagagactgcgtatttcaatgaa 371

                                                                       
Query: 301 gaagctgagtgtgctcgtgctgctgtcaatgaggttgtgggcatgtttgaacgattgttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gaagctgagtgtgctcgtgctgctgtcaatgaggttgtgggcatgtttgaacgattgttg 431

                                                                       
Query: 361 gcgaggttgccggagaaggatagagcagctttgcagagatcaatgggtttgaagattgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gcgaggttgccggagaaggatagagcagctttgcagagatcaatgggtttgaagattgaa 491

                                               
Query: 421 cagttgaaagctgagcttcaacaattggatgagtaa 456
           ||||||||||||||||||||||||||||||||||||
Sbjct: 492 cagttgaaagctgagcttcaacaattggatgagtaa 527