Miyakogusa Predicted Gene
- Lj0g3v0288719.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0288719.1 Non Chatacterized Hit- tr|J3MXH8|J3MXH8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G1,37.61,0.00000000000006,seg,NULL; OS11G0103400 PROTEIN,NULL;
ARIADNE RING ZINC FINGER,NULL; no description,Zinc finger,
RING,CUFF.19309.1
(1485 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72360 1015 0.0
gnl|LJGI|FS329711 weakly similar to UniRef100_A7PDQ1 Cluster: Ch... 143 4e-33
gnl|LJGI|BP055574 similar to UniRef100_Q5CBF5 Cluster: Sensor pr... 141 1e-32
gnl|LJGI|TC80130 similar to UniRef100_A7PDQ1 Cluster: Chromosome... 92 1e-17
>gnl|LJGI|TC72360
Length = 788
Score = 1015 bits (512), Expect = 0.0
Identities = 512/512 (100%)
Strand = Plus / Plus
Query: 1 atgggtctcacctattcttgtttccaccctctcactcgccgccgtacaagaaaaagggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 atgggtctcacctattcttgtttccaccctctcactcgccgccgtacaagaaaaagggtc 336
Query: 61 gctgctcactcttccgccgtcaaggtcacccccgccgccggcaccaacaccttcccacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gctgctcactcttccgccgtcaaggtcacccccgccgccggcaccaacaccttcccacct 396
Query: 121 acctctgccggtaacggcctccataccgtcactgaccactccaaaactaactacgacggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 acctctgccggtaacggcctccataccgtcactgaccactccaaaactaactacgacggc 456
Query: 181 gaaaacaacgacgttaaggtcctcaattccgaaaaagacgtcatcggagagagttcaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gaaaacaacgacgttaaggtcctcaattccgaaaaagacgtcatcggagagagttcaaac 516
Query: 241 gacgcgccgccgttcatctgcgaaatctgcacggaaaccaaaaccgcgtgggagtctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gacgcgccgccgttcatctgcgaaatctgcacggaaaccaaaaccgcgtgggagtctttc 576
Query: 301 accgccaccaccaccacatgctcccaccacgcgttttgctccgagtgcgttttcacctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 accgccaccaccaccacatgctcccaccacgcgttttgctccgagtgcgttttcacctac 636
Query: 361 gtgagctccaagcttcaacagaatcagatcaacatcacttgccccattccggaatgtacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gtgagctccaagcttcaacagaatcagatcaacatcacttgccccattccggaatgtacg 696
Query: 421 gggttgttggaggcggaggattgccgcgcgattctcccgccggaggtggttgaccggtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gggttgttggaggcggaggattgccgcgcgattctcccgccggaggtggttgaccggtgg 756
Query: 481 ctgacggcgttgtgcgaggcgattatcaccgc 512
||||||||||||||||||||||||||||||||
Sbjct: 757 ctgacggcgttgtgcgaggcgattatcaccgc 788
Score = 71.9 bits (36), Expect = 1e-11
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1013 tgttggaggcggaggattgccgtgcgattctcccggaggaggtgtttgacaggtgg 1068
|||||||||||||||||||||| |||||||||||| ||||||| ||||| |||||
Sbjct: 701 tgttggaggcggaggattgccgcgcgattctcccgccggaggtggttgaccggtgg 756
Score = 61.9 bits (31), Expect = 1e-08
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 839 acgcggcgccatttatctgcgaaatctgcacggagactaaaacggcgtgggagtc 893
||||| |||| || |||||||||||||||||||| || ||||| |||||||||||
Sbjct: 518 acgcgccgccgttcatctgcgaaatctgcacggaaaccaaaaccgcgtgggagtc 572
>gnl|LJGI|FS329711 weakly similar to UniRef100_A7PDQ1 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 708
Score = 143 bits (72), Expect = 4e-33
Identities = 150/176 (85%)
Strand = Plus / Plus
Query: 946 tacgtgcggtccaaggttgaggagaatgtgatcaacattaagtgtcctgtttcaggatgt 1005
||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||
Sbjct: 492 tacgtgcggtccaagcttgaggagaacgtgatcaacatccggtgtcctgtttctggatgt 551
Query: 1006 tcaggcctgttggaggcggaggattgccgtgcgattctcccggaggaggtgtttgacagg 1065
||||| || | |||||||||||||| || ||||||||| || |||||||||||| ||
Sbjct: 552 tcaggtttgcttgaggcggaggattgtcgcgcgattctctcgccggaggtgtttgatcgg 611
Query: 1066 tgggggaaggcggcgagtgaggcgatgattgctgagtcggagaagttctactgccc 1121
||||||| |||| || | |||||| || |||| | ||||||||| |||||||||||
Sbjct: 612 tgggggacggcgacgtgcgaggcgttgtttgcggtgtcggagaaattctactgccc 667
Score = 99.6 bits (50), Expect = 5e-20
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 430 gaggcggaggattgccgcgcgattctcccgccggaggtggttgaccggtggctgacggcg 489
|||||||||||||| |||||||||||| ||||||||||| |||| |||||| |||||||
Sbjct: 564 gaggcggaggattgtcgcgcgattctctcgccggaggtgtttgatcggtgggggacggcg 623
Query: 490 ttgtgcgaggcgattatcaccgcgtcggagaaattctactgtccgtttgtggattgctct 549
|||||||||| | | | | |||||||||||||||||| ||||| ||||||||||
Sbjct: 624 acgtgcgaggcgttgtttgcggtgtcggagaaattctactgcccgttcaaggattgctct 683
Query: 550 gctatgttgatcgatgatgggg 571
| ||||||| ||||||||||
Sbjct: 684 acgctgttgattgatgatgggg 705
>gnl|LJGI|BP055574 similar to UniRef100_Q5CBF5 Cluster: Sensor protein; n=1; Thermotoga
sp. RQ7|Rep: Sensor protein - Thermotoga sp. RQ7, partial
(4%)
Length = 484
Score = 141 bits (71), Expect = 1e-32
Identities = 71/71 (100%)
Strand = Plus / Minus
Query: 1415 ataactgtggaactcctaacttaaataagaagagccattactgcgacacctgtaggcgta 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ataactgtggaactcctaacttaaataagaagagccattactgcgacacctgtaggcgta 425
Query: 1475 cgtactaagga 1485
|||||||||||
Sbjct: 424 cgtactaagga 414
>gnl|LJGI|TC80130 similar to UniRef100_A7PDQ1 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 662
Score = 91.7 bits (46), Expect = 1e-17
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 1369 gaaggctgcatgtacatgagatgcaggtgtggacataccttctgttataactgtggaact 1428
||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||| ||
Sbjct: 1 gaaggatgcatgtacatgaaatgcaggtgtggacatgccttctgttacaactgtggagct 60
Query: 1429 cctaac 1434
||||||
Sbjct: 61 cctaac 66