Miyakogusa Predicted Gene
- Lj0g3v0288319.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0288319.1 tr|D9WK16|D9WK16_9ACTO Radical SAM
OS=Streptomyces himastatinicus ATCC 53653 GN=SSOG_03293 PE=3
SV=1,27.47,3.8, ,CUFF.19274.1
(294 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65888 similar to UniRef100_A7QF57 Cluster: Chromosome... 464 e-130
gnl|LJGI|DC595814 similar to UniRef100_A7Q6V7 Cluster: Chromosom... 135 2e-31
gnl|LJGI|TC66106 similar to UniRef100_A7QF57 Cluster: Chromosome... 100 9e-21
gnl|LJGI|GO005216 similar to UniRef100_A7PXZ3 Cluster: Chromosom... 92 2e-18
gnl|LJGI|TC71815 similar to UniRef100_P45432 Cluster: COP9 signa... 90 9e-18
gnl|LJGI|TC58111 similar to UniRef100_A7PXZ3 Cluster: Chromosome... 90 9e-18
>gnl|LJGI|TC65888 similar to UniRef100_A7QF57 Cluster: Chromosome undetermined
scaffold_87, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_87, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (49%)
Length = 733
Score = 464 bits (234), Expect = e-130
Identities = 246/250 (98%)
Strand = Plus / Minus
Query: 45 acatatgggtgtgggcgagaaagccctaaactcattatcgaacggtggcgagttcaagct 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 acatatgggtgtgggcgagaaagccctaaactcattatcgaacggtggcgagttcaagct 366
Query: 105 cctccgcgtcggtgggtcagaattggaaacggagcgagtcacgccacgcgatggaagcaa 164
|||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 365 cctccgtgtcggtgggtcagaattggaaacggagtgagtcacgcgacgcgatggaagcaa 306
Query: 165 agaagcgcagaaaccgcaactcgatgagaagcgcctcaagctgcaccatcgggttcttgt 224
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agaagtgcagaaaccgcaactcgatgagaagcgcctcaagctgcaccatcgggttcttgt 246
Query: 225 tggtatcagcgatgaagagatgtcgcatgatcttcgagtagagccctgcgtacgtctcga 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tggtatcagcgatgaagagatgtcgcatgatcttcgagtagagccctgcgtacgtctcga 186
Query: 285 tgtcgagtga 294
||||||||||
Sbjct: 185 tgtcgagtga 176
>gnl|LJGI|DC595814 similar to UniRef100_A7Q6V7 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 549
Score = 135 bits (68), Expect = 2e-31
Identities = 83/88 (94%)
Strand = Plus / Minus
Query: 45 acatatgggtgtgggcgagaaagccctaaactcattatcgaacggtggcgagttcaagct 104
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 343 acatatgggtgtgggcgagaaagccctaaactcattatcgaacgatggcgagttcgagct 284
Query: 105 cctccgcgtcggtgggtcagaattggaa 132
|||||| ||| ||| |||||||||||||
Sbjct: 283 cctccgtgtcagtgagtcagaattggaa 256
Score = 101 bits (51), Expect = 2e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 180 gcaactcgatgagaagcgcctcaagctgcaccatcgggttcttgttggtatcagcgatga 239
|||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||
Sbjct: 211 gcaactcgatgagaagcgcctcaagctgcaccgttgggttcttgttggtatcggcgatga 152
Query: 240 agagatgtcgcatga 254
| ||| | |||||||
Sbjct: 151 aaagaagccgcatga 137
>gnl|LJGI|TC66106 similar to UniRef100_A7QF57 Cluster: Chromosome undetermined
scaffold_87, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_87, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (90%)
Length = 766
Score = 99.6 bits (50), Expect = 9e-21
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 45 acatatgggtgtgggcgagaaagccctaaactcattatcgaacggtggcgagttcaagct 104
|||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||
Sbjct: 289 acatatgggtgtgggcgagaaaaccctaagctcattatagaacggtggcgagttcaagct 230
Query: 105 cc 106
||
Sbjct: 229 cc 228
>gnl|LJGI|GO005216 similar to UniRef100_A7PXZ3 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 710
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 188 atgagaagcgcctcaagctgcaccatcgggttcttgttggtatcagcgatgaagagatgt 247
|||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||| |
Sbjct: 119 atgagaagcgcctcaagctgcatcgtcgggttcttgtttgtatcgacgatgaagagaagc 60
Query: 248 cgcatgatcttcga 261
||||||||||||||
Sbjct: 59 cgcatgatcttcga 46
>gnl|LJGI|TC71815 similar to UniRef100_P45432 Cluster: COP9 signalosome complex
subunit 1; n=1; Arabidopsis thaliana|Rep: COP9
signalosome complex subunit 1 - Arabidopsis thaliana
(Mouse-ear cress), partial (37%)
Length = 732
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 192 gaagcgcctcaagctgcaccatcgggttcttgttggtatcagcgatgaagagatgtcgca 251
|||||||||||||||||||| | ||||||||||||| ||| |||||||||||| | ||||
Sbjct: 348 gaagcgcctcaagctgcaccgtggggttcttgttggcatcggcgatgaagagaagccgca 289
Query: 252 tgatcttcg 260
|||||||||
Sbjct: 288 tgatcttcg 280
>gnl|LJGI|TC58111 similar to UniRef100_A7PXZ3 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1627
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 192 gaagcgcctcaagctgcaccatcgggttcttgttggtatcagcgatgaagagatgtcgca 251
|||||||||||||||||||| | ||||||||||||| ||| |||||||||||| | ||||
Sbjct: 308 gaagcgcctcaagctgcaccgtggggttcttgttggcatcggcgatgaagagaagccgca 249
Query: 252 tgatcttcg 260
|||||||||
Sbjct: 248 tgatcttcg 240