Miyakogusa Predicted Gene
- Lj0g3v0288299.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0288299.1 tr|G2XMB8|G2XMB8_ORYBR Hypothetical_protein
OS=Oryza brachyantha GN=Ob11g0080L20_2 PE=4 SV=1,55.13,2e-19,MFS,Major
facilitator superfamily domain,CUFF.19276.1
(234 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60642 similar to UniRef100_A7QAL1 Cluster: Chromosome... 363 e-100
gnl|LJGI|FS325111 weakly similar to UniRef100_A7QAK3 Cluster: Ch... 230 3e-60
gnl|LJGI|FS330882 similar to UniRef100_A7QAL1 Cluster: Chromosom... 210 3e-54
gnl|LJGI|TC65620 weakly similar to UniRef100_A7QAL1 Cluster: Chr... 113 5e-25
gnl|LJGI|FS320214 similar to UniRef100_A7PTF4 Cluster: Chromosom... 92 2e-18
>gnl|LJGI|TC60642 similar to UniRef100_A7QAL1 Cluster: Chromosome undetermined
scaffold_71, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_71, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (61%)
Length = 1320
Score = 363 bits (183), Expect = e-100
Identities = 219/231 (94%)
Strand = Plus / Plus
Query: 4 ggtctgattattggcccagcattgggaggctatttagctcagccagtagagaaattccca 63
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 645 ggtctgattattggcccagcattgggaggctatttggctcagccagtagagaaataccct 704
Query: 64 cagatatttccaaaggattccttttgggataagtttccatacttcttgccctgctttatc 123
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 catatatttccaaaggattccttttgggataagtttccatacttcttgccctgctttata 764
Query: 124 atatcaggactagcatttgcagtacttattgcctgtatctggattccggaaacacttcac 183
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 atatcaggactggcatttacagtacttattgcctgtatctggattccggaaacacttcac 824
Query: 184 tatcacaaaggtagcaacgagtccacagatgatgctgacactttagaaaat 234
||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 825 aatcacaaaggtagaaatgagtccacagatgatgctgaagctttagaaaat 875
>gnl|LJGI|FS325111 weakly similar to UniRef100_A7QAK3 Cluster: Chromosome undetermined
scaffold_71, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_71, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 744
Score = 230 bits (116), Expect = 3e-60
Identities = 143/152 (94%)
Strand = Plus / Plus
Query: 1 atgggtctgattattggcccagcattgggaggctatttagctcagccagtagagaaattc 60
|||||||||||| |||| |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 540 atgggtctgatttttgggccagcattcggaggctatttggctcagccagtagagaaattc 599
Query: 61 ccacagatatttccaaaggattccttttgggataagtttccatacttcttgccctgcttt 120
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 600 ccacagatatttccaaaggactccttttgggataagtttccatacttcttgccctgctct 659
Query: 121 atcatatcaggactagcatttgcagtacttat 152
|| |||| |||||| |||||||||||||||||
Sbjct: 660 ataatattaggactggcatttgcagtacttat 691
>gnl|LJGI|FS330882 similar to UniRef100_A7QAL1 Cluster: Chromosome undetermined
scaffold_71, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_71, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (28%)
Length = 594
Score = 210 bits (106), Expect = 3e-54
Identities = 121/126 (96%)
Strand = Plus / Plus
Query: 4 ggtctgattattggcccagcattgggaggctatttagctcagccagtagagaaattccca 63
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 469 ggtctgattattggcccagcattgggaggctatttggctcagccagtagagaaataccct 528
Query: 64 cagatatttccaaaggattccttttgggataagtttccatacttcttgccctgctttatc 123
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 catatatttccaaaggattccttttgggataagtttccatacttcttgccctgctttata 588
Query: 124 atatca 129
||||||
Sbjct: 589 atatca 594
>gnl|LJGI|TC65620 weakly similar to UniRef100_A7QAL1 Cluster: Chromosome undetermined
scaffold_71, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_71, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (38%)
Length = 770
Score = 113 bits (57), Expect = 5e-25
Identities = 102/117 (87%)
Strand = Plus / Plus
Query: 14 ttggcccagcattgggaggctatttagctcagccagtagagaaattcccacagatatttc 73
|||| |||||| ||||||| ||||| ||||||||| || ||||| |||||| ||||||
Sbjct: 636 ttgggccagcactgggaggttatttggctcagccaacagtgaaatacccacatctatttc 695
Query: 74 caaaggattccttttgggataagtttccatacttcttgccctgctttatcatatcag 130
||| |||||||||||||| |||||||||||||||||||||| |||||| |||||||
Sbjct: 696 caagtgattccttttgggacaagtttccatacttcttgccctcctttataatatcag 752
>gnl|LJGI|FS320214 similar to UniRef100_A7PTF4 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 800
Score = 91.7 bits (46), Expect = 2e-18
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 14 ttggcccagcattgggaggctatttagctcagccagtagagaaattcccacagatatttc 73
|||| |||||||||||||| ||||| ||||||||| | ||||| |||||| ||||||
Sbjct: 471 ttgggccagcattgggaggttatttggctcagccaacattgaaatacccacatctatttc 530
Query: 74 caaaggattccttttgggataagtttccatacttcttgccct 115
||| |||||||||||||| ||||||||||| ||||||||||
Sbjct: 531 caagtgattccttttgggacaagtttccatatttcttgccct 572