Miyakogusa Predicted Gene
- Lj0g3v0288039.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0288039.2 Non Chatacterized Hit- tr|I1L288|I1L288_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9259 PE=,78.36,0,MFS
general substrate transporter,Major facilitator superfamily domain,
general substrate transporte,CUFF.19258.2
(1314 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76372 similar to UniRef100_A7Q8X8 Cluster: Chromosome... 1419 0.0
gnl|LJGI|TC76046 similar to UniRef100_A7QS38 Cluster: Chromosome... 597 e-170
gnl|LJGI|TC58832 weakly similar to UniRef100_Q8H6R3 Cluster: Nod... 101 1e-20
gnl|LJGI|TC59557 weakly similar to UniRef100_A7QS38 Cluster: Chr... 92 1e-17
gnl|LJGI|FS360516 similar to UniRef100_A7QS38 Cluster: Chromosom... 64 2e-09
>gnl|LJGI|TC76372 similar to UniRef100_A7Q8X8 Cluster: Chromosome chr9 scaffold_65,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_65, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 1183
Score = 1419 bits (716), Expect = 0.0
Identities = 751/760 (98%), Gaps = 2/760 (0%)
Strand = Plus / Plus
Query: 556 cttcttgctataggtgagggagcagtaaagcagaagaagagaaggcctaaacgtggggaa 615
|||||||||||||||||||||| | || |||||||||||||||||||||||||||||||
Sbjct: 1 cttcttgctataggtgagggagggggaa-gcagaagaagagaaggcctaaacgtggggaa 59
Query: 616 gattttaagttcaccgaggctgtagtaaaggctgatttctggcttctattttttgtttat 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gattttaagttcaccgaggctgtagtaaaggctgatttctggcttctattttttgtttat 119
Query: 676 tttgttggtgttggcactggggtcactgttctcaataatctagctcaaataggtattgca 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tttgttggtgttggcactggggtcactgttctcaataatctagctcaaataggtattgca 179
Query: 736 caaggcgaggaagataccactatattactgtcaattttcagtttttgcaattttgtgggt 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 caaggcgaggaagataccactatattactgtcaattttcagtttttgcaattttgtgggt 239
Query: 796 cggcttggtggaggagttgtttcagaacattttgtcagg-acaaaaacactcccaaggac 854
|||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 240 cggcttggtggaggagttgtttcaaaacattttgggggggacaaaaacactcccaaggac 299
Query: 855 agcctggttgacatgcacacaaatagttatgctcatcatgtatgttctgtttgcctttgc 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 agcctggttgacatgcacacaaatagttatgctcatcatgtatgttctgtttgcctttgc 359
Query: 915 tgtcaaaggagccctttatcctgcagttgcattccttggtatctgctatggtgtgcaagt 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tgtcaaaggagccctttatcctgcagttgcattccttggtatctgctatggtgtgcaagt 419
Query: 975 ttctgtgatgatccccaccgtttccgagctttttggtttgaagcactttggtgtgttggg 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttctgtgatgatccccaccgtttccgagctttttggtttgaagcactttggtgtgttggg 479
Query: 1035 cagcgtcatgtccatcggtaatccacttggtgcgttccttttctcagctctgctagcagg 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cagcgtcatgtccatcggtaatccacttggtgcgttccttttctcagctctgctagcagg 539
Query: 1095 ttatatatatgatagtgaggctgcaaagcagcatggtattaaccttatagcttctggtgc 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttatatatatgatagtgaggctgcaaagcagcatggtattaaccttatagcttctggtgc 599
Query: 1155 tgcctgcgtgggtgcaaactgctttaagctgacctttttgattcttgctggtgtttgtgg 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tgcctgcgtgggtgcaaactgctttaagctgacctttttgattcttgctggtgtttgtgg 659
Query: 1215 cgctggcatcatcttgagcattattctgacactgagaattaagccagtttaccagatgct 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cgctggcatcatcttgagcattattctgacactgagaattaagccagtttaccagatgct 719
Query: 1275 ttatgccggaggttctttcaagctgcctcaaagatcttga 1314
||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ttatgccggaggttctttcaagctgcctcaaagatcttga 759
>gnl|LJGI|TC76046 similar to UniRef100_A7QS38 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (37%)
Length = 904
Score = 597 bits (301), Expect = e-170
Identities = 301/301 (100%)
Strand = Plus / Plus
Query: 1 atgagaaacttccctgttagtagaggcaaagtttcaggaatcctgaaaggttatgggggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 atgagaaacttccctgttagtagaggcaaagtttcaggaatcctgaaaggttatgggggg 663
Query: 61 ctcagcgctgcagtttttactgaaatttacagcatcgtgcttcataatgattctcctaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ctcagcgctgcagtttttactgaaatttacagcatcgtgcttcataatgattctcctaac 723
Query: 121 ttcctgttgttgcttgccgttggtattcctgttatttgcttaagtatgatgtttcttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ttcctgttgttgcttgccgttggtattcctgttatttgcttaagtatgatgtttcttgtt 783
Query: 181 agggcttgtactccagcttctgatgaagactctgtagctagtggccaatttatatttatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 agggcttgtactccagcttctgatgaagactctgtagctagtggccaatttatatttatc 843
Query: 241 caagtttctagcgtggtcttggggttgtatcttctagcaaccacaatatttggcaatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 caagtttctagcgtggtcttggggttgtatcttctagcaaccacaatatttggcaatgct 903
Query: 301 c 301
|
Sbjct: 904 c 904
>gnl|LJGI|TC58832 weakly similar to UniRef100_Q8H6R3 Cluster: Nodulin-like protein;
n=1; Poncirus trifoliata|Rep: Nodulin-like protein -
Poncirus trifoliata (Hardy orange), partial (26%)
Length = 778
Score = 101 bits (51), Expect = 1e-20
Identities = 168/207 (81%)
Strand = Plus / Plus
Query: 820 gaacattttgtcaggacaaaaacactcccaaggacagcctggttgacatgcacacaaata 879
||||||||||||| |||||||||| | || ||||| ||| ||||||||||||| |||
Sbjct: 1 gaacattttgtcaagacaaaaacaattccgcggacattttggatgacatgcacacagata 60
Query: 880 gttatgctcatcatgtatgttctgtttgcctttgctgtcaaaggagccctttatcctgca 939
||| ||||||| || |||||||||||| ||| |||| ||| | ||||| ||||||
Sbjct: 61 accatgatcatcatataccttctgtttgcctatgcgatcaagggaacactttaccctgca 120
Query: 940 gttgcattccttggtatctgctatggtgtgcaagtttctgtgatgatccccaccgtttcc 999
||||||| ||||||| ||||| || |||||| | || | |||||||||| || ||
Sbjct: 121 attgcatttcttggtacctgcttcggcgtgcaattctccatactgatccccactgtctcg 180
Query: 1000 gagctttttggtttgaagcactttggt 1026
|||||||||||||||||||||||||||
Sbjct: 181 gagctttttggtttgaagcactttggt 207
Score = 63.9 bits (32), Expect = 2e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1247 tgagaattaagccagtttaccagatgctttatgccggaggttctttcaagct 1298
||||||||| ||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 428 tgagaattaggcctgtttaccaaatgctttatgctggtggttctttcaagct 479
>gnl|LJGI|TC59557 weakly similar to UniRef100_A7QS38 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (43%)
Length = 982
Score = 91.7 bits (46), Expect = 1e-17
Identities = 170/210 (80%), Gaps = 6/210 (2%)
Strand = Plus / Plus
Query: 1 atgagaaacttccctgttagtagaggcaaagtttcaggaatcctgaaaggttatgggggg 60
|||||||| |||||||| | |||||||| || | ||||||||||||||||||||||||
Sbjct: 601 atgagaaatttccctgtcactagaggcaccgtcgcgggaatcctgaaaggttatgggggg 660
Query: 61 ctcagcgctgcagtttttactgaaatttacagcatcgtgcttcataatgattctcct--- 117
|| ||||||| |||| |||||||||||||| ||| ||| ||| | ||||||
Sbjct: 661 atcgccgctgcaattttcactgaaatttacag---ggtggttcttaaaaactctcctagc 717
Query: 118 aacttcctgttgttgcttgccgttggtattcctgttatttgcttaagtatgatgtttctt 177
|| ||||| ||||| ||| |||| |||||||||||| | ||||| ||| |||||||| ||
Sbjct: 718 aatttcctcttgttccttaccgtcggtattcctgttgtatgcttcagtgtgatgtttttt 777
Query: 178 gttagggcttgtactccagcttctgatgaa 207
||| | |||||||||| ||||||| ||||
Sbjct: 778 gttcgaccttgtactccggcttctgctgaa 807
>gnl|LJGI|FS360516 similar to UniRef100_A7QS38 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(5%)
Length = 667
Score = 63.9 bits (32), Expect = 2e-09
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1247 tgagaattaagccagtttaccagatgctttatgccggaggttctttcaagct 1298
||||||||| ||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 661 tgagaattaggcctgtttaccaaatgctttatgctggtggttctttcaagct 610