Miyakogusa Predicted Gene

Lj0g3v0287989.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0287989.1 Non Chatacterized Hit- tr|J3KWB9|J3KWB9_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G1,61.19,0.0000000000001,PTR2,Proton-dependent oligopeptide
transporter family; OLIGOPEPTIDE TRANSPORTER-RELATED,NULL;
OLIGOP,45447_g.1
         (666 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60542 similar to UniRef100_A7NYK8 Cluster: Chromosome...   105   3e-22

>gnl|LJGI|TC60542 similar to UniRef100_A7NYK8 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (98%)
          Length = 2040

 Score =  105 bits (53), Expect = 3e-22
 Identities = 110/129 (85%)
 Strand = Plus / Plus

                                                                        
Query: 307  cccatttcaatcttttggcaagtgcctcagtatttcattataggatgtgctgaggtgttc 366
            ||||| ||||| |||||||| || |||||||||||| ||||||| ||||| || ||||||
Sbjct: 1516 cccatgtcaatattttggcaggttcctcagtatttccttataggttgtgcagaagtgttc 1575

                                                                        
Query: 367  acttttattgggcaaatggaatttttctatgagcaagcccctgatgcaatgaggagcttg 426
            || || ||||| ||  |||| || ||||||||||||||||||||||| ||||| ||| ||
Sbjct: 1576 acattcattggtcagttggagttcttctatgagcaagcccctgatgccatgagaagcctg 1635

                     
Query: 427  tgttctgct 435
             ||||||||
Sbjct: 1636 agttctgct 1644