Miyakogusa Predicted Gene
- Lj0g3v0287979.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0287979.4 tr|G7JMY6|G7JMY6_MEDTR Peptide transporter PTR1
OS=Medicago truncatula GN=MTR_4g015080 PE=3
SV=1,85.15,0,PTR2,Proton-dependent oligopeptide transporter family; no
description,NULL; PTR2_1,PTR2 family proto,CUFF.19298.4
(987 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC595323 similar to UniRef100_A7PP13 Cluster: Chromosom... 270 2e-71
gnl|LJGI|GO012324 similar to UniRef100_A7PP12 Cluster: Chromosom... 248 6e-65
gnl|LJGI|TC65399 similar to UniRef100_A7NYK8 Cluster: Chromosome... 58 1e-07
gnl|LJGI|TC60542 similar to UniRef100_A7NYK8 Cluster: Chromosome... 58 1e-07
>gnl|LJGI|DC595323 similar to UniRef100_A7PP13 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 232
Score = 270 bits (136), Expect = 2e-71
Identities = 201/220 (91%), Gaps = 2/220 (0%)
Strand = Plus / Plus
Query: 418 tgccatccaacgtcaggacaaactgcagcttgctatatatcactctacttgattgctctt 477
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 5 tgccatccaacgtcaggacaaactgcagcttgctttatagcactctacttgattgctctt 64
Query: 478 ggaactggtggtatcaaaccatgtgtctcatcttttggcgctgaccaatttgatgacaat 537
||||||||||||||||||||||||||||| |||||||| |||||||||||| || || ||
Sbjct: 65 ggaactggtggtatcaaaccatgtgtctcgtcttttggtgctgaccaatttcatcac-at 123
Query: 538 gatgaaactgagaggaaaaagaagagctctttcttcaattggttttacttctcaatcaac 597
|||| || ||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 124 gatg-aagtgacaggaaaaacaacagctctttcttcaattggttttacttctcaatcaat 182
Query: 598 atcggcgcgctcatcgcttcctccgtgttagtttggatac 637
|| ||||| ||| | ||||| || ||||||||||||||||
Sbjct: 183 attggcgcactcgttgcttcttctgtgttagtttggatac 222
>gnl|LJGI|GO012324 similar to UniRef100_A7PP12 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 322
Score = 248 bits (125), Expect = 6e-65
Identities = 192/213 (90%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 15 taagaaacacgatgcggaagaagatgacttatatacaaaagacgggacactcgacatcaa 74
||||||||| || ||| |||||||||||| ||||||||||| |||||| || |||||||
Sbjct: 111 taagaaacatgacacggtagaagatgacttgtatacaaaagatgggacaatcaacatcaa 170
Query: 75 aaagcaacctgccaacaagaaagagactggaaattggaaagcatgccgctatattctcgg 134
|| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 171 taaacaacctgccaacaagaaagagactggagattggaaagcatgccgttatattctcgg 230
Query: 135 aaatgaatgttgcgaaagattggcgtactatggcatgagtacaaacctagtgaactatct 194
|||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||
Sbjct: 231 aaatgaatgttgcgaaagattggcatactatggcatgaaaatgaacctagtgaactatct 290
Query: 195 caaggaacgcttcaaccaaggaaatgcagctgc 227
| ||||||||||| ||||||||||||| ||||
Sbjct: 291 ccaggaacgcttc-cccaaggaaatgcaactgc 322
>gnl|LJGI|TC65399 similar to UniRef100_A7NYK8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 722
Score = 58.0 bits (29), Expect = 1e-07
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 278 ttggagcctttttagctgattcatacttgggaagatactggacaattgccagcttctcat 337
||||||| ||||| |||||||| || |||||||||| ||||||||||| | || |||
Sbjct: 360 ttggagcatttttggctgattcctatctgggaagatattggacaattgcatgtttttcaa 419
Query: 338 ctatctatgtcattggaatgacact 362
|||||||| ||||||||||||||
Sbjct: 420 taatctatgttattggaatgacact 444
Score = 54.0 bits (27), Expect = 2e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 559 aagagctctttcttcaattggttttacttctcaatcaacatcggcgcgctcatcgcttc 617
||||| ||||||||||| ||||| || |||||||||||||| || || ||||| |||||
Sbjct: 644 aagagttctttcttcaactggttctatttctcaatcaacattggtgctctcattgcttc 702
>gnl|LJGI|TC60542 similar to UniRef100_A7NYK8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 2040
Score = 58.0 bits (29), Expect = 1e-07
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 278 ttggagcctttttagctgattcatacttgggaagatactggacaattgccagcttctcat 337
||||||| ||||| |||||||| || |||||||||| ||||||||||| | || |||
Sbjct: 416 ttggagcatttttggctgattcctatctgggaagatattggacaattgcatgtttttcaa 475
Query: 338 ctatctatgtcattggaatgacact 362
|||||||| ||||||||||||||
Sbjct: 476 taatctatgttattggaatgacact 500
Score = 54.0 bits (27), Expect = 2e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 559 aagagctctttcttcaattggttttacttctcaatcaacatcggcgcgctcatcgcttc 617
||||| ||||||||||| ||||| || |||||||||||||| || || ||||| |||||
Sbjct: 700 aagagttctttcttcaactggttctatttctcaatcaacattggtgctctcattgcttc 758