Miyakogusa Predicted Gene
- Lj0g3v0287859.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0287859.1 tr|G7JSZ3|G7JSZ3_MEDTR F-box/FBD/LRR-repeat
protein OS=Medicago truncatula GN=MTR_4g092510 PE=4
SV=1,46.73,0.00000000000003,F-box,F-box domain, cyclin-like; FAMILY
NOT NAMED,NULL; F-box domain,F-box domain, cyclin-like;
seg,,CUFF.19238.1
(1056 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 408 e-113
gnl|LJGI|FS338181 similar to UniRef100_A0DQC5 Cluster: Chromosom... 176 2e-43
gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 151 1e-35
gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 141 1e-32
gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cy... 131 1e-29
gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 119 4e-26
gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 111 9e-24
gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 105 6e-22
gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cy... 88 1e-16
gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 84 2e-15
>gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago
truncatula|Rep: Cyclin-like F-box - Medicago truncatula
(Barrel medic), partial (6%)
Length = 881
Score = 408 bits (206), Expect = e-113
Identities = 254/270 (94%)
Strand = Plus / Plus
Query: 778 cagcaactcagtgggagcaatctttcttcccttgaacaagtgaatattgatgcagaaatt 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 cagcaactcagtgggagcaatctttcttcccttgaacaagtgaatattgatgcagaaatt 186
Query: 838 cggactgttgaagacgcaaatattgatttagaaacaagcttaaattaccccatgtgtcct 897
||| ||||||| || |||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 187 cggtctgttgatgaagcaaatgttgatttagaaacaagcttaaattaccccacatgtcct 246
Query: 898 tttattctactgagctggctggtagagcttgccaatataaaatcattgaccatatctgca 957
|| ||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 247 ttgattttactgagctggctggtagagcttaccaatataaaatcattgacagtatctgca 306
Query: 958 agtactcttcaggttctcttcctaattcctcatttgttggaacttaaactcaattccttg 1017
|| |||||||||||||||||||||||||||||||| |||||||| || |||| |||||||
Sbjct: 307 agaactcttcaggttctcttcctaattcctcatttattggaactcaagctcacttccttg 366
Query: 1018 agtagcttgaagtcattgaaagtaaaacag 1047
||||||||||||||||||||||||||||||
Sbjct: 367 agtagcttgaagtcattgaaagtaaaacag 396
>gnl|LJGI|FS338181 similar to UniRef100_A0DQC5 Cluster: Chromosome undetermined
scaffold_6, whole genome shotgun sequence; n=1;
Paramecium tetraurelia|Rep: Chromosome undetermined
scaffold_6, whole genome shotgun sequence - Paramecium
tetraurelia, partial (3%)
Length = 740
Score = 176 bits (89), Expect = 2e-43
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 968 aggttctcttcctaattcctcatttgttggaacttaaactcaattccttgagtagcttga 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 aggttctcttcctaattcctcatttgttggaacttaaactcaattccttgagtagcttga 96
Query: 1028 agtcattgaaagtaaaacagattatctga 1056
|||||||||||||||||||||||||||||
Sbjct: 97 agtcattgaaagtaaaacagattatctga 125
Score = 103 bits (52), Expect = 2e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 778 cagcaactcagtgggagcaatctttcttcccttgaacaagtgaatattgatg 829
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 cagcaactcagtgggagcaatctttcttcccttgaacaagtgaatattgatg 740
>gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 552
Score = 151 bits (76), Expect = 1e-35
Identities = 127/144 (88%)
Strand = Plus / Plus
Query: 59 agagtgaaagtgaagatgaagagaacaaagacaggcttaatgacatacctgattccattc 118
||||||| |||||| |||||||||||||||| || || | |||| | ||||||| | |||
Sbjct: 353 agagtgagagtgaaaatgaagagaacaaagatagactcagtgacttgcctgattgcgttc 412
Query: 119 tccttcacattctgtcatttctgaaagccaagtacgcagttcgaacttgcattttatcca 178
|||||||||||||||||||| |||| |||||||| ||||||| |||||||| |||||||
Sbjct: 413 tccttcacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatcca 472
Query: 179 caagatggaaggatctttggaaac 202
|||||||||||||||| |||||||
Sbjct: 473 caagatggaaggatctctggaaac 496
>gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (23%)
Length = 714
Score = 141 bits (71), Expect = 1e-32
Identities = 119/135 (88%)
Strand = Plus / Plus
Query: 75 tgaagagaacaaagacaggcttaatgacatacctgattccattctccttcacattctgtc 134
|||||| |||||||||||||| | |||| | | ||||| |||||||||||||||| ||||
Sbjct: 185 tgaagacaacaaagacaggctcagtgacttgcatgattgcattctccttcacattttgtc 244
Query: 135 atttctgaaagccaagtacgcagttcgaacttgcattttatccacaagatggaaggatct 194
|||||||| ||||| |||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct: 245 atttctgagcgccaaatacgcagttcgaacatgcatgttatccaaaagatggaaggatct 304
Query: 195 ttggaaactccttcc 209
||||||| ||||||
Sbjct: 305 ctggaaacgccttcc 319
Score = 69.9 bits (35), Expect = 3e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 341 aaagaattgtaaagtatgctgtttcgcgcaatgtccagcgattagga 387
||||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 466 aaagaatagtaaactatgctgtttcccgcaatgtccagcgattagga 512
>gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (24%)
Length = 859
Score = 131 bits (66), Expect = 1e-29
Identities = 176/212 (83%), Gaps = 3/212 (1%)
Strand = Plus / Plus
Query: 1 atgtctaattcaacggatgagatgttgattttgtttaattcaacgaagagaggaaggaag 60
|||||||||||||| ||||||||||||||| | ||| | |||||||||||||||
Sbjct: 93 atgtctaattcaactgatgagatgttgattccgccgaatgc---gaagagaggaaggaac 149
Query: 61 agtgaaagtgaagatgaagagaacaaagacaggcttaatgacatacctgattccattctc 120
||||| | |||| ||||||| |||||||||||||| | |||| | |||||| |||||||
Sbjct: 150 agtgagaatgaaaatgaagacaacaaagacaggctcagtgaccttcctgatggcattctc 209
Query: 121 cttcacattctgtcatttctgaaagccaagtacgcagttcgaacttgcattttatccaca 180
||||||||| | |||||| |||| ||||| || ||||||| ||| || || ||||| |
Sbjct: 210 cttcacattttatcatttatgaatgccaaatatgcagttcaaacatgtatcttatcggct 269
Query: 181 agatggaaggatctttggaaactccttccaac 212
|||||||||||||| ||||||| |||||||||
Sbjct: 270 agatggaaggatctctggaaacaccttccaac 301
>gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 508
Score = 119 bits (60), Expect = 4e-26
Identities = 120/140 (85%)
Strand = Plus / Plus
Query: 63 tgaaagtgaagatgaagagaacaaagacaggcttaatgacatacctgattccattctcct 122
||||| |||| ||||||| |||||||| || || | |||| | ||||||| |||||||||
Sbjct: 142 tgaaaatgaaaatgaagataacaaagatagactcagtgacttgcctgattgcattctcct 201
Query: 123 tcacattctgtcatttctgaaagccaagtacgcagttcgaacttgcattttatccacaag 182
||||||||| |||||| |||||||||| ||| |||| ||||||||| || ||||||||
Sbjct: 202 tcacattctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtccacaag 261
Query: 183 atggaaggatctttggaaac 202
|||||||||||| |||||||
Sbjct: 262 atggaaggatctctggaaac 281
Score = 89.7 bits (45), Expect = 3e-17
Identities = 129/157 (82%)
Strand = Plus / Plus
Query: 247 ttcgtgtattggcttttgactctttgcgatggctcagtcgcgctgcacggtctagatgtt 306
||||||| | |||||||||||||| |||||||||| ||||||||||||||||||| ||
Sbjct: 341 ttcgtgtctcggcttttgactcttcgcgatggctcgaccgcgctgcacggtctagatttt 400
Query: 307 aaacatcttggattcattcatcattaccgccttgaaagaattgtaaagtatgctgtttcg 366
| ||| ||| |||||| | | ||| ||| |||| |||||||| |||||||||||
Sbjct: 401 gagcatgatggtcacattcagcctcacctcctcaaaaggattgtaaaatatgctgtttca 460
Query: 367 cgcaatgtccagcgattaggattgactgtcacatgtg 403
| ||||||||| |||||||||||| | ||||| ||||
Sbjct: 461 cacaatgtccaacgattaggattgtccgtcacgtgtg 497
>gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (37%)
Length = 1467
Score = 111 bits (56), Expect = 9e-24
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 896 cttttattctactgagctggctggtagagcttgccaatataaaatcattgaccatatctg 955
||||||||||||| |||||||||||||| ||| ||||||||||||||||||| | ||
Sbjct: 1024 cttttattctacttagctggctggtagaccttaccaatataaaatcattgacggtttcca 1083
Query: 956 caagtactcttcaggttctcttcctaattcctcatttgtt 995
|||||||||||||||||||| || |||||||||||||||
Sbjct: 1084 caagtactcttcaggttctcatctcaattcctcatttgtt 1123
Score = 109 bits (55), Expect = 4e-23
Identities = 127/151 (84%)
Strand = Plus / Plus
Query: 75 tgaagagaacaaagacaggcttaatgacatacctgattccattctccttcacattctgtc 134
||||||||| ||||||||||||| |||| ||||||||| || |||||| ||||| | ||
Sbjct: 217 tgaagagaataaagacaggcttagtgacttacctgattgtatactcctttacattttatc 276
Query: 135 atttctgaaagccaagtacgcagttcgaacttgcattttatccacaagatggaaggatct 194
|||| |||||||||| ||| ||| | ||| ||| | ||||||| |||||||||||||||
Sbjct: 277 atttgtgaaagccaaacacgtagtccaaacatgcgtattatccaaaagatggaaggatct 336
Query: 195 ttggaaactccttccaacacttgttttacat 225
|||||||| || ||||| ||| ||||||||
Sbjct: 337 ttggaaacatctcccaacccttattttacat 367
Score = 99.6 bits (50), Expect = 3e-20
Identities = 166/204 (81%), Gaps = 3/204 (1%)
Strand = Plus / Plus
Query: 263 tgactctttgcgatggctcagtcgcgctgcacggtctagatgttaaacatcttggattca 322
|||||||| ||||| ||||| ||||||||||||||||||| || | | |||||| | |
Sbjct: 427 tgactcttcgcgatcgctcaaccgcgctgcacggtctagattttgagcgtcttggttgta 486
Query: 323 ttcatcattaccgccttgaaagaattgtaaagtatgctgtttcgcgcaatgtccagcgat 382
|||| | | ||| ||| |||| |||||||||||||| ||||| | |||||| |||||||
Sbjct: 487 ttcagcctcacctcctcaaaaggattgtaaagtatgccgtttcacacaatgtgcagcgat 546
Query: 383 taggattgactgtc---acatgtgacaatgaacacgttctgcaatgcatcttttcatgtc 439
|||||||||||||| |||| ||| | | ||||| ||| | | ||||| ||||||| |
Sbjct: 547 taggattgactgtcacaacatctgatatttaacactttccgtattgcattttttcatcta 606
Query: 440 agactttgacttctcttaagctca 463
||||| |||| |||||||||||||
Sbjct: 607 agactctgacatctcttaagctca 630
>gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 732
Score = 105 bits (53), Expect = 6e-22
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 81 gaacaaagacaggcttaatgacatacctgattccattctccttcacattctgtcatttct 140
|||||| |||||||||| ||| | || |||| | |||| ||||||||| |||||||| |
Sbjct: 247 gaacaatgacaggcttagtgatttgcccgattgcgttctgcttcacattttgtcatttgt 306
Query: 141 gaaagccaagtacgcagttcgaacttgcattttatccacaagatggaaggatctttggaa 200
|||||||| | | ||||||| ||||||||| ||||||||||||||||||||||| |||||
Sbjct: 307 gaaagccaggaatgcagttcaaacttgcatattatccacaagatggaaggatctatggaa 366
Query: 201 a 201
|
Sbjct: 367 a 367
>gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 555
Score = 87.7 bits (44), Expect = 1e-16
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 75 tgaagagaacaaagacaggcttaatgacatacctgattccattctccttcacattctgtc 134
|||||||||| |||||||||| | |||| |||| |||| ||| ||||||||| || ||||
Sbjct: 176 tgaagagaacgaagacaggctaagtgacttacccgattgcatcctccttcactttttgtc 235
Query: 135 atttctgaaagccaagtacgcagttcgaacttgcattttatccacaagatggaaggatct 194
||||||||| ||| |||||||||||| ||| |||||||||||||||||| ||||
Sbjct: 236 atttctgaacgccggacgtgcagttcgaactaccatgttatccacaagatggaagaatct 295
Query: 195 ttggaaac 202
|||||||
Sbjct: 296 ctggaaac 303
>gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 718
Score = 83.8 bits (42), Expect = 2e-15
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 902 ttctactgagctggctggtagagcttgccaatataaaatcattgaccatatctgcaagta 961
||||||| |||||||||| ||||||| | ||||| ||||||||||| | ||| ||| ||
Sbjct: 59 ttctactcagctggctggaagagcttactaatatcaaatcattgacagtctctacaaata 118
Query: 962 ctcttcaggttctcttcctaattcct 987
||||||||||||||||| ||||||||
Sbjct: 119 ctcttcaggttctcttcttaattcct 144