Miyakogusa Predicted Gene
- Lj0g3v0287839.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0287839.1 tr|G7KNR1|G7KNR1_MEDTR F-box family protein
OS=Medicago truncatula GN=MTR_6g025090 PE=4 SV=1,36.84,0.018,FAMILY
NOT NAMED,NULL; seg,NULL; F-box,F-box domain, cyclin-like; F-box
domain,F-box domain, cyclin-,CUFF.19240.1
(933 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 494 e-139
gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 278 6e-74
gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 200 1e-50
gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 194 7e-49
gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cy... 186 2e-46
gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cy... 133 2e-30
gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 90 3e-17
gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 56 4e-07
gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 56 4e-07
gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cy... 54 2e-06
>gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 552
Score = 494 bits (249), Expect = e-139
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 atggatgagatgttgattccaccaaatgcaaagagaggtagggagagtgagagtgagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atggatgagatgttgattccaccaaatgcaaagagaggtagggagagtgagagtgagagt 363
Query: 61 gaaaatgaagagaacaaagatagactcagtgacttgcctgattgcgttctccttcacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaaaatgaagagaacaaagatagactcagtgacttgcctgattgcgttctccttcacatt 423
Query: 121 ctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaagatggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaagatggaag 483
Query: 181 gatctctggaaacgtcttccttccctcatactacattcctcagatttttcaacttttaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gatctctggaaacgtcttccttccctcatactacattcctcagatttttcaacttttaag 543
Query: 241 ggtttcacc 249
|||||||||
Sbjct: 544 ggtttcacc 552
>gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 508
Score = 278 bits (140), Expect = 6e-74
Identities = 305/360 (84%)
Strand = Plus / Plus
Query: 60 tgaaaatgaagagaacaaagatagactcagtgacttgcctgattgcgttctccttcacat 119
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 148 tgaaaatgaagataacaaagatagactcagtgacttgcctgattgcattctccttcacat 207
Query: 120 tctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaagatggaa 179
||| ||||||||||| ||||| || ||||||||||||| ||| ||||||||||||||
Sbjct: 208 tctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtccacaagatggaa 267
Query: 180 ggatctctggaaacgtcttccttccctcatactacattcctcagatttttcaacttttaa 239
||||||||||||||||||||||||||||||||||| |||||| | |||| || | |||
Sbjct: 268 ggatctctggaaacgtcttccttccctcatactactgtcctcaaacttttggacatataa 327
Query: 240 gggtttcaccaaattcgtgtctacaattttgactcttcgtgatggctcaattgcactcca 299
| | |||||||||||||||||| ||||||||||||| |||||||| | || || ||
Sbjct: 328 gagcttcaccaaattcgtgtctcggcttttgactcttcgcgatggctcgaccgcgctgca 387
Query: 300 tggtctagatttgaagcgtcttgggcgcattcagccttgcctcttcaaaaggatcataaa 359
||||||||||| ||| | ||| | |||||||||| |||| |||||||||| ||||
Sbjct: 388 cggtctagattttgagcatgatggtcacattcagcctcacctcctcaaaaggattgtaaa 447
Query: 360 atatgtcatttcacacaatgttcagcaattaggattgtgtgtcaattgtgatattgaaca 419
||||| ||||||||||||| || | ||||||||||| |||| |||| |||||||||
Sbjct: 448 atatgctgtttcacacaatgtccaacgattaggattgtccgtcacgtgtgctattgaaca 507
>gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (23%)
Length = 714
Score = 200 bits (101), Expect = 1e-50
Identities = 239/285 (83%)
Strand = Plus / Plus
Query: 1 atggatgagatgttgattccaccaaatgcaaagagaggtagggagagtgagagtgagagt 60
|||||||||||||||||||| || ||||| |||||||| || | ||||||| ||||| |
Sbjct: 120 atggatgagatgttgattccgccgaatgcgaagagaggaagaaacagtgagactgagact 179
Query: 61 gaaaatgaagagaacaaagatagactcagtgacttgcctgattgcgttctccttcacatt 120
|||| |||||| |||||||| || ||||||||||||| ||||||| ||||||||||||||
Sbjct: 180 gaaattgaagacaacaaagacaggctcagtgacttgcatgattgcattctccttcacatt 239
Query: 121 ctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaagatggaag 180
|||||||| ||| ||||| || ||||||| ||| |||| ||||||| ||||||||||
Sbjct: 240 ttgtcatttctgagcgccaaatacgcagttcgaacatgcatgttatccaaaagatggaag 299
Query: 181 gatctctggaaacgtcttccttccctcatactacattcctcagatttttcaacttttaag 240
|||||||||||||| ||||| ||| || ||| |||||||||||| || || |||
Sbjct: 300 gatctctggaaacgccttccgaaccttattttactctcctcagattttgacacattcaag 359
Query: 241 ggtttcaccaaattcgtgtctacaattttgactcttcgtgatggc 285
|||||||||||| |||||||| |||||||| | ||||||||||
Sbjct: 360 tttttcaccaaatttgtgtctaccattttgacccgtcgtgatggc 404
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 508 tcttttaatttgccagcattaaccaccttgcatct 542
||||| ||||||||||| |||||||||||||||||
Sbjct: 636 tctttgaatttgccagctttaaccaccttgcatct 670
>gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 732
Score = 194 bits (98), Expect = 7e-49
Identities = 206/242 (85%)
Strand = Plus / Plus
Query: 47 gtgagagtgagagtgaaaatgaagagaacaaagatagactcagtgacttgcctgattgcg 106
|||| ||||||||||| | | ||| |||||| || || || ||||| ||||| |||||||
Sbjct: 222 gtgaaagtgagagtgagagtaaagtgaacaatgacaggcttagtgatttgcccgattgcg 281
Query: 107 ttctccttcacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattat 166
|||| ||||||||| ||||||||||||| |||| | |||||||||||||||||| |||||
Sbjct: 282 ttctgcttcacattttgtcatttgtgaaagccaggaatgcagttcaaacttgcatattat 341
Query: 167 ccacaagatggaaggatctctggaaacgtcttccttccctcatactacattcctcagatt 226
||||||||||||||||||| |||||| |||||||||| ||||| ||| |||| |||| |
Sbjct: 342 ccacaagatggaaggatctatggaaaagtcttccttcgctcattttactttccccagact 401
Query: 227 tttcaacttttaagggtttcaccaaattcgtgtctacaattttgactcttcgtgatggct 286
|||| || || ||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 402 tttcgacattgaagattttcaccaaattcgtgtctaagcttttggaacttcgtgatggct 461
Query: 287 ca 288
||
Sbjct: 462 ca 463
>gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 555
Score = 186 bits (94), Expect = 2e-46
Identities = 241/290 (83%)
Strand = Plus / Plus
Query: 4 gatgagatgttgattccaccaaatgcaaagagaggtagggagagtgagagtgagagtgaa 63
||||||||||||||||| ||||||||||||||||| ||| | |||| |||||||| ||||
Sbjct: 114 gatgagatgttgattccgccaaatgcaaagagagggaggcacagtgggagtgagaatgaa 173
Query: 64 aatgaagagaacaaagatagactcagtgacttgcctgattgcgttctccttcacattctg 123
| |||||||||| |||| || || |||||||| || |||||| | ||||||||| || ||
Sbjct: 174 attgaagagaacgaagacaggctaagtgacttacccgattgcatcctccttcactttttg 233
Query: 124 tcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaagatggaaggat 183
|||||| |||| ||| |||||||| |||| || |||||||||||||||||| ||
Sbjct: 234 tcatttctgaacgccggacgtgcagttcgaactaccatgttatccacaagatggaagaat 293
Query: 184 ctctggaaacgtcttccttccctcatactacattcctcagatttttcaacttttaagggt 243
||||||||||| ||||| | || | ||| |||||||||||||| ||| | ||| ||
Sbjct: 294 ctctggaaacgcattcctactcttaatttacgctcctcagatttttccactgtgaagagt 353
Query: 244 ttcaccaaattcgtgtctacaattttgactcttcgtgatggctcaattgc 293
||||| ||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 354 ttcactgtattcgtgtctacaattttgactcttcgtgattgttcaattgc 403
>gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (24%)
Length = 859
Score = 133 bits (67), Expect = 2e-30
Identities = 159/190 (83%), Gaps = 6/190 (3%)
Strand = Plus / Plus
Query: 4 gatgagatgttgattccaccaaatgcaaagagaggtagggagagtgagagtgagagtgaa 63
||||||||||||||||| || ||||| |||||||| ||| | ||||||| ||| |
Sbjct: 108 gatgagatgttgattccgccgaatgcgaagagaggaaggaacagtgagaatga------a 161
Query: 64 aatgaagagaacaaagatagactcagtgacttgcctgattgcgttctccttcacattctg 123
|||||||| |||||||| || ||||||||| | |||||| || |||||||||||||| |
Sbjct: 162 aatgaagacaacaaagacaggctcagtgaccttcctgatggcattctccttcacatttta 221
Query: 124 tcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaagatggaaggat 183
|||||| |||||||||| |||||||||||||| || | ||||| | ||||||||||||
Sbjct: 222 tcatttatgaatgccaaatatgcagttcaaacatgtatcttatcggctagatggaaggat 281
Query: 184 ctctggaaac 193
||||||||||
Sbjct: 282 ctctggaaac 291
Score = 58.0 bits (29), Expect = 1e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 514 aatttgccagcattaaccaccttgcatct 542
|||||||||||||||||||||||||||||
Sbjct: 597 aatttgccagcattaaccaccttgcatct 625
>gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (37%)
Length = 1467
Score = 89.7 bits (45), Expect = 3e-17
Identities = 138/169 (81%)
Strand = Plus / Plus
Query: 25 aatgcaaagagaggtagggagagtgagagtgagagtgaaaatgaagagaacaaagataga 84
||||| |||||||| ||| || ||||| ||||| ||| | ||||||||| ||||| ||
Sbjct: 176 aatgccaagagaggaaggaggaatgagattgagactgatattgaagagaataaagacagg 235
Query: 85 ctcagtgacttgcctgattgcgttctccttcacattctgtcatttgtgaatgccaagtat 144
|| |||||||| |||||||| | |||||| ||||| | ||||||||||| ||||| |
Sbjct: 236 cttagtgacttacctgattgtatactcctttacattttatcatttgtgaaagccaaacac 295
Query: 145 gcagttcaaacttgcacattatccacaagatggaaggatctctggaaac 193
| ||| ||||| ||| |||||||| ||||||||||||||| |||||||
Sbjct: 296 gtagtccaaacatgcgtattatccaaaagatggaaggatctttggaaac 344
Score = 89.7 bits (45), Expect = 3e-17
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 244 ttcaccaaattcgtgtctacaattttgactcttcgtgatggctcaattgcactccatggt 303
|||||||||||||||||| || |||||||||| ||| |||||| || || || |||
Sbjct: 402 ttcaccaaattcgtgtctcgccttctgactcttcgcgatcgctcaaccgcgctgcacggt 461
Query: 304 ctagatttgaagcgtcttgggcgcattcagccttgcctcttcaaaaggatcataaaatat 363
|||||||| |||||||||| | ||||||||| |||| |||||||||| |||| |||
Sbjct: 462 ctagattttgagcgtcttggttgtattcagcctcacctcctcaaaaggattgtaaagtat 521
Query: 364 gtcatttcacacaatgttcagcaattaggattg 396
| | ||||||||||||| |||| ||||||||||
Sbjct: 522 gccgtttcacacaatgtgcagcgattaggattg 554
Score = 71.9 bits (36), Expect = 7e-12
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 730 tcttctccatgccttcgtacctttacctttacaggtactgtttgtgagactctcagcggg 789
||||||||| | |||||||||||| ||||||| || ||| || ||||||| || | ||
Sbjct: 903 tcttctccaagtcttcgtacctttgcctttacgggcactccttttgagactatctgtgga 962
Query: 790 aggaatctttcttccattgaacatgtaaatcttgatatac 829
|| ||| ||||||||||||| ||||||||| |||||||||
Sbjct: 963 agaaatatttcttccattgagcatgtaaattttgatatac 1002
>gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 718
Score = 56.0 bits (28), Expect = 4e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 856 ctcaactggttggaagagcttaccaatataaaatcattgaccatctctataagtactctt 915
|||| |||| ||||||||||||| ||||| ||||||||||| |||||| || |||||||
Sbjct: 64 ctcagctggctggaagagcttactaatatcaaatcattgacagtctctacaaatactctt 123
>gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (6%)
Length = 881
Score = 56.0 bits (28), Expect = 4e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 861 ctggttggaagagcttaccaatataaaatcattgac 896
|||| ||| |||||||||||||||||||||||||||
Sbjct: 261 ctggctggtagagcttaccaatataaaatcattgac 296
>gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (15%)
Length = 592
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 166 tccacaagatggaaggatctctggaaa 192
|||||||||||||||||||||||||||
Sbjct: 281 tccacaagatggaaggatctctggaaa 307