Miyakogusa Predicted Gene

Lj0g3v0287739.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0287739.3 tr|G7KPS9|G7KPS9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_6g0,71.11,0.0000000008, ,CUFF.19230.3
         (231 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV778667 similar to UniRef100_Q9SGQ6 Cluster: T23E18.21...   379   e-105
gnl|LJGI|TC67484 similar to UniRef100_Q9SGQ6 Cluster: T23E18.21;...   260   3e-69
gnl|LJGI|TC68038 weakly similar to UniRef100_A7NVU0 Cluster: Chr...   210   3e-54

>gnl|LJGI|AV778667 similar to UniRef100_Q9SGQ6 Cluster: T23E18.21; n=1; Arabidopsis
           thaliana|Rep: T23E18.21 - Arabidopsis thaliana
           (Mouse-ear cress), partial (3%)
          Length = 527

 Score =  379 bits (191), Expect = e-105
 Identities = 223/231 (96%), Gaps = 2/231 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggattcagagcaagggttgctctgtggtcaatttcaaattgccagtatcaccatagcc 60
           ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||
Sbjct: 14  atggattcagagcaagggtgg-tctgtggtcaatttcaaat-gccagtatcaccatagcc 71

                                                                       
Query: 61  gtaaaatcaaattctctcgaaatcttgccacctcaacaacagcaagttgtcgatgcactc 120
           ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||
Sbjct: 72  gtaaaatcaaattctctcgaaagtctgccacctcaacaacagcaagttgtcgatgcactc 131

                                                                       
Query: 121 tgctcgggtgagagaaaaaaggcttccgacttacttttggatttcggttacagaagccgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tgctcgggtgagagaaaaaaggcttccgacttacttttggatttcggttacagaagccgc 191

                                                              
Query: 181 tcattgaaagctgatgattttgttggtattttaaactactgtgcacgctct 231
           |||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 192 tcattgaaagctgatgatttggttggtattttaagctactgtgcacgctct 242


>gnl|LJGI|TC67484 similar to UniRef100_Q9SGQ6 Cluster: T23E18.21; n=1; Arabidopsis
           thaliana|Rep: T23E18.21 - Arabidopsis thaliana
           (Mouse-ear cress), partial (11%)
          Length = 816

 Score =  260 bits (131), Expect = 3e-69
 Identities = 131/131 (100%)
 Strand = Plus / Plus

                                                                       
Query: 101 agcaagttgtcgatgcactctgctcgggtgagagaaaaaaggcttccgacttacttttgg 160
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 agcaagttgtcgatgcactctgctcgggtgagagaaaaaaggcttccgacttacttttgg 266

                                                                       
Query: 161 atttcggttacagaagccgctcattgaaagctgatgattttgttggtattttaaactact 220
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atttcggttacagaagccgctcattgaaagctgatgattttgttggtattttaaactact 326

                      
Query: 221 gtgcacgctct 231
           |||||||||||
Sbjct: 327 gtgcacgctct 337



 Score =  202 bits (102), Expect = 7e-52
 Identities = 102/102 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggattcagagcaagggttgctctgtggtcaatttcaaattgccagtatcaccatagcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  atggattcagagcaagggttgctctgtggtcaatttcaaattgccagtatcaccatagcc 140

                                                     
Query: 61  gtaaaatcaaattctctcgaaatcttgccacctcaacaacag 102
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gtaaaatcaaattctctcgaaatcttgccacctcaacaacag 182


>gnl|LJGI|TC68038 weakly similar to UniRef100_A7NVU0 Cluster: Chromosome chr18
           scaffold_1, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (7%)
          Length = 1257

 Score =  210 bits (106), Expect = 3e-54
 Identities = 121/126 (96%)
 Strand = Plus / Plus

                                                                       
Query: 102 gcaagttgtcgatgcactctgctcgggtgagagaaaaaaggcttccgacttacttttgga 161
           |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gcaagttgtcaaggcactctgctcgggtgagagaaaaaaggcttccgacttacttttgga 795

                                                                       
Query: 162 tttcggttacagaagccgctcattgaaagctgatgattttgttggtattttaaactactg 221
           ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 796 ttttggttacagaagccgctcattaaaagctgatgattttgttggtattttaaagtactg 855

                 
Query: 222 tgcacg 227
           ||||||
Sbjct: 856 tgcacg 861



 Score = 77.8 bits (39), Expect = 3e-14
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                              
Query: 52  accatagccgtaaaatcaaattctctcgaaatcttgccacctcaacaacag 102
           |||||||  |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 633 accataggggtaaaatcaaattctctcgaaatcttaccacctcaacaacag 683