Miyakogusa Predicted Gene

Lj0g3v0287689.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0287689.1 Non Chatacterized Hit- tr|K4BWB8|K4BWB8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,30,0.00000000000003,MFS general substrate transporter,Major
facilitator superfamily domain, general substrate
transporte,CUFF.19235.1
         (1689 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS346402 similar to UniRef100_Q2HSV0 Cluster: TGF-beta ...   615   e-175

>gnl|LJGI|FS346402 similar to UniRef100_Q2HSV0 Cluster: TGF-beta receptor, type I/II
            extracellular region; n=1; Medicago truncatula|Rep:
            TGF-beta receptor, type I/II extracellular region -
            Medicago truncatula (Barrel medic), partial (19%)
          Length = 513

 Score =  615 bits (310), Expect = e-175
 Identities = 325/330 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1248 agtaggccacgtgttcaatgtgcttgctttggttgtctctgctcttgttgaatcaaagag 1307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86   agtaggccacgtgttcaatgtgcttgctttggttgtctctgctcttgttgaatcaaagag 145

                                                                        
Query: 1308 gctcaagatagctcataaacaccagctccaaattcaacatgaccccacagttaacatgtc 1367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146  gctcaagatagctcataaacaccagctccaaattcaacatgaccccacagttaacatgtc 205

                                                                        
Query: 1368 agtactctggttgtttccacaattagtgctaatgggcattggagaagcatttcattttcc 1427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206  agtactctggttgtttccacaattagtgctaatgggcattggagaagcatttcattttcc 265

                                                                        
Query: 1428 agcacaagttacattctactaccaacagcttccacaatcactgcggagcacatcaactgc 1487
            ||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 266  agcacaagttacattctactaccaacaacttccacattcactgcgaagcacatcaactgc 325

                                                                        
Query: 1488 tatgatttccatgcttgtagggattgctttttacctgagcacggccttaattgaccaagt 1547
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 326  tatgatttccatgcttgtagggattgctttttacctgagcacggtcttaattgaccaagt 385

                                          
Query: 1548 tcgtagggttactgattggttacctggtga 1577
            ||||||||||||||||||||||| ||||||
Sbjct: 386  tcgtagggttactgattggttacttggtga 415