Miyakogusa Predicted Gene

Lj0g3v0287649.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0287649.1 Non Chatacterized Hit- tr|B9G712|B9G712_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,39.13,3.1,MsrA,Peptide methionine sulphoxide reductase MsrA; no
description,Peptide methionine sulphoxide redu,CUFF.19233.1
         (576 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63936 similar to UniRef100_Q6QPJ5 Cluster: Methionine...  1134   0.0  
gnl|LJGI|TC63861 similar to UniRef100_A7PBQ8 Cluster: Chromosome...    62   4e-09

>gnl|LJGI|TC63936 similar to UniRef100_Q6QPJ5 Cluster: Methionine sulfoxide reductase
           A; n=1; Populus trichocarpa x Populus deltoides|Rep:
           Methionine sulfoxide reductase A - Populus jackii (Balm
           of Gilead) (Populus trichocarpa x Populusdeltoides),
           partial (95%)
          Length = 829

 Score = 1134 bits (572), Expect = 0.0
 Identities = 575/576 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctacgagtgatttggacaccaaccctgctcttaaactggattcggatactccaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  atggctacgagtgatttggacaccaaccctgctcttaaactggattcggatactccaata 119

                                                                       
Query: 61  aacccggatcacgagtttgcagagttcggagcgggttgtttctggggcgcggagctcgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aacccggatcacgagtttgcagagttcggagcgggttgtttctggggcgcggagctcgca 179

                                                                       
Query: 121 tttcaacgaattgcaggtgtggtgaagactgaggttggatattcccagggtcaccatgat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tttcaacgaattgcaggtgtggtgaagactgaggttggatattcccagggtcaccatgat 239

                                                                       
Query: 181 aacccggattacaaattggtttgcaccggaaccaccaaccatgcggagttggttcggatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aacccggattacaaattggtttgcaccggaaccaccaaccatgcggagttggttcggatc 299

                                                                       
Query: 241 cagttcgacccgaaactctgcccctacaccaatctcctcaatgtcttttgggctcgaatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cagttcgacccgaaactctgcccctacaccaatctcctcaatgtcttttgggctcgaatt 359

                                                                       
Query: 301 gacccaaccgctctcaatcgccagggaggtgatgtgggtacacagtacagatcaggaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gacccaaccgctctcaatcgccagggaggtgatgtgggtacacagtacagatcaggaata 419

                                                                       
Query: 361 tactactacaatgaaacccaggctcgtttagctcaggagtcaaaagaagctaagcaattg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tactactacaatgaaacccaggctcgtttagctcaggagtcaaaagaagctaagcaattg 479

                                                                       
Query: 421 gaattgaaggagaaggttgtgacagaaattcttccagcaaagaggttctacagagcagag 480
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gaattgaaggggaaggttgtgacagaaattcttccagcaaagaggttctacagagcagag 539

                                                                       
Query: 481 gaataccatcagcaatatcttgagaagggtggaggtaaaggcctcaaacaatctgctgaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gaataccatcagcaatatcttgagaagggtggaggtaaaggcctcaaacaatctgctgaa 599

                                               
Query: 541 aagggttgcactgatcccattaggtgttatggttaa 576
           ||||||||||||||||||||||||||||||||||||
Sbjct: 600 aagggttgcactgatcccattaggtgttatggttaa 635


>gnl|LJGI|TC63861 similar to UniRef100_A7PBQ8 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (89%)
          Length = 1121

 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                       
Query: 432 gaaggttgtgacagaaattcttccagcaaagaggttctacagagcagaggaataccatca 491
           |||| |||| ||||| |||||||| || |||| ||||||||| ||||| |||||||||||
Sbjct: 678 gaagattgtcacagagattcttcctgccaagaagttctacagggcagaagaataccatca 737

                          
Query: 492 gcaatatcttgagaa 506
            || || ||||||||
Sbjct: 738 acagtaccttgagaa 752