Miyakogusa Predicted Gene

Lj0g3v0287499.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0287499.1 Non Chatacterized Hit- tr|I1MLX7|I1MLX7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,85.98,0,MS_channel,Mechanosensitive ion channel MscS; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Sm-li,CUFF.19221.1
         (2073 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66057 weakly similar to UniRef100_A7QN75 Cluster: Chr...   952   0.0  

>gnl|LJGI|TC66057 weakly similar to UniRef100_A7QN75 Cluster: Chromosome undetermined
            scaffold_131, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_131, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (23%)
          Length = 628

 Score =  952 bits (480), Expect = 0.0
 Identities = 480/480 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1594 gatggtgttcagatgattgtggaagagatgaatatcttgacaacagtgtttcttcgatat 1653
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    gatggtgttcagatgattgtggaagagatgaatatcttgacaacagtgtttcttcgatat 61

                                                                        
Query: 1654 gacaatgagaaaatatactaccctaacgcagttttgctcactaagccaataagcaatttc 1713
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   gacaatgagaaaatatactaccctaacgcagttttgctcactaagccaataagcaatttc 121

                                                                        
Query: 1714 tataggagtccagagatgtgcgactcaattgatttcactattgatgtgtcaactcccatg 1773
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  tataggagtccagagatgtgcgactcaattgatttcactattgatgtgtcaactcccatg 181

                                                                        
Query: 1774 gaaacaatcattgccgtcaagaaatcaatacaaatgtacatcgagagcaagccaaaatat 1833
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  gaaacaatcattgccgtcaagaaatcaatacaaatgtacatcgagagcaagccaaaatat 241

                                                                        
Query: 1834 tggaatcctaagcacagtgtgctagccaaacaaatagaccatgtggacaagttgaagctg 1893
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  tggaatcctaagcacagtgtgctagccaaacaaatagaccatgtggacaagttgaagctg 301

                                                                        
Query: 1894 tgtttatgtgtgcaacacaccatcaaccatcagaactacggcgagcgaagcgttcgaata 1953
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  tgtttatgtgtgcaacacaccatcaaccatcagaactacggcgagcgaagcgttcgaata 361

                                                                        
Query: 1954 acggagctggtcttggaattgaaaaagatatttgagatgcatggtgtcaagtaccataat 2013
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  acggagctggtcttggaattgaaaaagatatttgagatgcatggtgtcaagtaccataat 421

                                                                        
Query: 2014 cttcctcaggagatccaccttaccaagatgaacatggagcaggggagagttctattttaa 2073
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422  cttcctcaggagatccaccttaccaagatgaacatggagcaggggagagttctattttaa 481