Miyakogusa Predicted Gene
- Lj0g3v0287449.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0287449.2 Non Chatacterized Hit- tr|F6H257|F6H257_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,61.95,0,TPR-like,NULL; PPR,Pentatricopeptide repeat;
PPR_3,Pentatricopeptide repeat; coiled-coil,NULL; PPR: ,CUFF.19266.2
(1518 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CN825203 similar to UniRef100_A7P1K5 Cluster: Chromosom... 922 0.0
gnl|LJGI|TC79149 weakly similar to UniRef100_A7R2K2 Cluster: Chr... 811 0.0
gnl|LJGI|BW626131 similar to UniRef100_A7P1K5 Cluster: Chromosom... 797 0.0
gnl|LJGI|TC70800 similar to UniRef100_A7P1K5 Cluster: Chromosome... 773 0.0
>gnl|LJGI|CN825203 similar to UniRef100_A7P1K5 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 629
Score = 922 bits (465), Expect = 0.0
Identities = 468/469 (99%)
Strand = Plus / Minus
Query: 1050 caaggtgccaaacatcctcctgattgggtattcacggaagggattgattgaaaaggcaga 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 caaggtgccaaacatcctcctgattgggtattcacggaagggattgattgaaaaggcaga 570
Query: 1110 aacgatgctccgaagcatggttgataaagggaagactcctactcctaacagttggtctat 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aacgatgctccgaagcatggttgataaagggaagactcctactcctaacagttggtctat 510
Query: 1170 tatagcatctgggcatgtggccaaggagaacatggagaaggcatttcagtgcttcaagga 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tatagcatctgggcatgtggccaaggagaacatggagaaggcatttcagtgcttcaagga 450
Query: 1230 ggctttggctgtgctagctgagaataaaggttggagaccaaaatctgatgttgtttccag 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggctttggctgtgctagctgagaataaaggttggagaccaaaatctgatgttgtttccag 390
Query: 1290 catattgagttgggttactgataacagagatatagaggaagtagaagattttgtaaattc 1349
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 catattgagttgggtttctgataacagagatatagaggaagtagaagattttgtaaattc 330
Query: 1350 attgaagaaagtgatgtcaatgaatagggacatgtatctgtctttgatcaagctatatgt 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 attgaagaaagtgatgtcaatgaatagggacatgtatctgtctttgatcaagctatatgt 270
Query: 1410 tagatgtgggagggaagtagatggggttttagagagcatgaaagctgacaatattgagct 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tagatgtgggagggaagtagatggggttttagagagcatgaaagctgacaatattgagct 210
Query: 1470 cgatgaagagatggaagaaattctcaactcaagattgcaacaatagtga 1518
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cgatgaagagatggaagaaattctcaactcaagattgcaacaatagtga 161
>gnl|LJGI|TC79149 weakly similar to UniRef100_A7R2K2 Cluster: Chromosome chr10
scaffold_433, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_433, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 936
Score = 811 bits (409), Expect = 0.0
Identities = 648/727 (89%), Gaps = 3/727 (0%)
Strand = Plus / Plus
Query: 11 caccgttctctgcgatcctccgcaacaagttccatagcttcaccgccacatttcagcttc 70
||||||| ||||||||||||||| |||||||||| | | ||||||| | ||||||||||
Sbjct: 213 caccgttttctgcgatcctccgccacaagttccagaacctcaccgcaaactttcagcttc 272
Query: 71 tgagaccgtattgctccgcctccaccactgtcacgattaaccggagaaacctctactcca 130
|||||| || |||||||||||||||| ||||||| | |||||| ||||||||||||
Sbjct: 273 tgagactataccgctccgcctccaccaccgtcacga---agcggagagacctctactcca 329
Query: 131 gaatcagccccctcggtgacccttctctcagcgtggttcccgttctcgaaaactggctcc 190
|||||||||| ||||| ||||||||| ||||||| ||||||||||||||||| ||| |||
Sbjct: 330 gaatcagccctctcggagacccttctgtcagcgttgttcccgttctcgaaaaatgggtcc 389
Query: 191 aagagggtcacgccgtcagggaccaggagctccagcgtatcgtcaaaactctacgcaccc 250
|| ||||| |||| ||| ||| || ||||||||| |||||||||||||| |||||||
Sbjct: 390 aacagggtaacgctatcaaggagaagcagctccagctcatcgtcaaaactctccgcaccc 449
Query: 251 ggaaacgcttcactcaagctctacaggtttctgaatggatgagtagcaaagggctctgcc 310
|||||||||||||||| || || ||||||||||| |||||||||||||||||||||||||
Sbjct: 450 ggaaacgcttcactcatgcacttcaggtttctgagtggatgagtagcaaagggctctgcc 509
Query: 311 caattttgccaggtgaccgagccgtgcagctagaacttattggtagagttcgtggactgg 370
|||||| ||| |||||||||||||||||||||| ||||| |||||||||| ||||||||
Sbjct: 510 caatttcgccgggtgaccgagccgtgcagctaggtcttatcggtagagttcatggactgg 569
Query: 371 agagtgcagagagctattttcagaatttgagtgatagtgacaaaactgaaaaggttcatg 430
|||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||
Sbjct: 570 agagtgcagagagctattttcagaatttgagtgatattgacaaaactgaaaaagtccatg 629
Query: 431 gtgcccttttgaattgttatgtgatggcaggatcagttgacaagtcactctcccagatgc 490
||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||
Sbjct: 630 gtgcccttttgaattgttacgtgagagcaggattagttgacaagtcactctcccagatgc 689
Query: 491 agaagatgaaggacatgggttttgtttctcctctccattacaacaatataatgagcctct 550
||||||||||||| ||||||| ||||||| |||| ||||||||||||||||| ||||||
Sbjct: 690 agaagatgaaggaaatgggttatgtttcttgtctcaattacaacaatataatgtgcctct 749
Query: 551 acacacgaactgaacaacatgagaaagtcccagatgttttggcaatgatgaaagaagacg 610
|| ||| || ||| |||||||||||||| || | ||||| |||||||||||||| ||||
Sbjct: 750 acgcacaaagtgaccaacatgagaaagtacctggggttttagcaatgatgaaagaggacg 809
Query: 611 gtgtttctcctgacattttcagctacaggatttgcttaaactcatatggcgcgagatctg 670
||||||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||||
Sbjct: 810 gtgtttctcctgacattttcagctacagggtttgcataaactcttatggcgccagatctg 869
Query: 671 acctcgagaatatggagaaactgttggagaaaattgaaacagaaggcgacattgccgtgg 730
||||||||||||||||||||||||||||| ||||||||| ||||||| ||| |||||
Sbjct: 870 acctcgagaatatggagaaactgttggaggaaattgaaagagaaggccacacatgcgtgg 929
Query: 731 attggat 737
|||||||
Sbjct: 930 attggat 936
>gnl|LJGI|BW626131 similar to UniRef100_A7P1K5 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 482
Score = 797 bits (402), Expect = 0.0
Identities = 408/410 (99%)
Strand = Plus / Plus
Query: 1 atggcatcatcaccgttctctgcgatcctccgcaacaagttccatagcttcaccgccaca 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 73 atggcatcatcaccgttctctgcaatcctccgcaacaagttccatagcttcaccgccaca 132
Query: 61 tttcagcttctgagaccgtattgctccgcctccaccactgtcacgattaaccggagaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tttcagcttctgagaccgtattgctccgcctccaccactgtcacgattaaccggagaaac 192
Query: 121 ctctactccagaatcagccccctcggtgacccttctctcagcgtggttcccgttctcgaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 193 ctctactccagaatcagccccctcggtgacccttctctcagcgtggttcctgttctcgaa 252
Query: 181 aactggctccaagagggtcacgccgtcagggaccaggagctccagcgtatcgtcaaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aactggctccaagagggtcacgccgtcagggaccaggagctccagcgtatcgtcaaaact 312
Query: 241 ctacgcacccggaaacgcttcactcaagctctacaggtttctgaatggatgagtagcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctacgcacccggaaacgcttcactcaagctctacaggtttctgaatggatgagtagcaaa 372
Query: 301 gggctctgcccaattttgccaggtgaccgagccgtgcagctagaacttattggtagagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gggctctgcccaattttgccaggtgaccgagccgtgcagctagaacttattggtagagtt 432
Query: 361 cgtggactggagagtgcagagagctattttcagaatttgagtgatagtga 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cgtggactggagagtgcagagagctattttcagaatttgagtgatagtga 482
>gnl|LJGI|TC70800 similar to UniRef100_A7P1K5 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 704
Score = 773 bits (390), Expect = 0.0
Identities = 486/518 (93%)
Strand = Plus / Plus
Query: 997 gaagctgagaaattacttggtcagtgggagttatctggtaacacttacgatttcaaggtg 1056
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 3 gaagctgagaaattacttggtgagtgggagttatctggtaacacttacgatttcagggtg 62
Query: 1057 ccaaacatcctcctgattgggtattcacggaagggattgattgaaaaggcagaaacgatg 1116
||||||||||||||||| || |||||| ||||||||||||||||||||| ||||| |||
Sbjct: 63 ccaaacatcctcctgatcggatattcaaagaagggattgattgaaaaggcggaaacaatg 122
Query: 1117 ctccgaagcatggttgataaagggaagactcctactcctaacagttggtctattatagca 1176
||||||||||||||||| |||||||||||||||| |||| ||||||||||||| | |||
Sbjct: 123 ctccgaagcatggttgagaaagggaagactcctaatccttacagttggtctatcgttgca 182
Query: 1177 tctgggcatgtggccaaggagaacatggagaaggcatttcagtgcttcaaggaggctttg 1236
|||||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 183 tctgggtatgtggcccaggagaacatggagaaggcatttcagtgcctcaaggaagctttg 242
Query: 1237 gctgtgctagctgagaataaaggttggagaccaaaatctgatgttgtttccagcatattg 1296
|||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 243 gctgtgctagctgagaataaaggttggagacccaaacctaatgttgtttccagcatattg 302
Query: 1297 agttgggttactgataacagagatatagaggaagtagaagattttgtaaattcattgaag 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agttgggttactgataacagagatatagaggaagtagaagattttgtaaattcattgaag 362
Query: 1357 aaagtgatgtcaatgaatagggacatgtatctgtctttgatcaagctatatgttagatgt 1416
||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||
Sbjct: 363 aaagtgatgtcaatgaatagggacatgtatcggtccttgatcaagctacatgttagatgt 422
Query: 1417 gggagggaagtagatggggttttagagagcatgaaagctgacaatattgagctcgatgaa 1476
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gggaaagaagtagatggggttttagagagcatgaaagctgacaatattgagctcgatgaa 482
Query: 1477 gagatggaagaaattctcaactcaagattgcaacaata 1514
||| |||| |||||||| || || ||||||||| ||||
Sbjct: 483 gagttggaggaaattcttaagtcgagattgcaataata 520