Miyakogusa Predicted Gene

Lj0g3v0287109.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0287109.1 Non Chatacterized Hit- tr|I1LDF4|I1LDF4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,29.01,2e-18,seg,NULL,CUFF.19171.1
         (969 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60392 weakly similar to UniRef100_Q9LT84 Cluster: UPF...  1913   0.0  

>gnl|LJGI|TC60392 weakly similar to UniRef100_Q9LT84 Cluster: UPF0496 protein
            At3g19330; n=1; Arabidopsis thaliana|Rep: UPF0496 protein
            At3g19330 - Arabidopsis thaliana (Mouse-ear cress),
            partial (24%)
          Length = 1284

 Score = 1913 bits (965), Expect = 0.0
 Identities = 968/969 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgatcaatagaaattctctccgaaaattagaatgctggaatgcctctccttcaaaatca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170  atgatcaatagaaattctctccgaaaattagaatgctggaatgcctctccttcaaaatca 229

                                                                        
Query: 61   tccaccgctttaagccctaattccagtactcaagagtacactcccgcaagcaccactccc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230  tccaccgctttaagccctaattccagtactcaagagtacactcccgcaagcaccactccc 289

                                                                        
Query: 121  agcgtctctcgtgagttcagcctcgccgtgcattccgcctcctacgccgaaacccgctcc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290  agcgtctctcgtgagttcagcctcgccgtgcattccgcctcctacgccgaaacccgctcc 349

                                                                        
Query: 181  ctgatccaagctgctccgccgcaaggccaaacgcgcctcctccatcccgatcgagagctc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350  ctgatccaagctgctccgccgcaaggccaaacgcgcctcctccatcccgatcgagagctc 409

                                                                        
Query: 241  gtcgaacaagcgctgatccgcgacgaaagcaccactcacagcgatctcatctccaaatac 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410  gtcgaacaagcgctgatccgcgacgaaagcaccactcacagcgatctcatctccaaatac 469

                                                                        
Query: 301  ttcgaccacagcgaaaccgcgtccgagctctgcctccaccttcaccaacacgcggaactc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470  ttcgaccacagcgaaaccgcgtccgagctctgcctccaccttcaccaacacgcggaactc 529

                                                                        
Query: 361  gcacgcgccatgtacgcgcctctccttgatcttttcgctctaatggaaccttcttgcgat 420
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 530  gcacgcgccatgtacgcgcctctccttgatattttcgctctaatggaaccttcttgcgat 589

                                                                        
Query: 421  cgcgcgttcatcctcttcctcgagttcgacaatcgcgacaatcctctccctaattcccac 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590  cgcgcgttcatcctcttcctcgagttcgacaatcgcgacaatcctctccctaattcccac 649

                                                                        
Query: 481  accttcggcgatattcgcagcgccttgtcggttctcaagacacagcttgacaaacgcttc 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650  accttcggcgatattcgcagcgccttgtcggttctcaagacacagcttgacaaacgcttc 709

                                                                        
Query: 541  ctcaaatcccggtccagggtcggccttatccgccgcgttgtcgcagcggcgcccgtctgc 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710  ctcaaatcccggtccagggtcggccttatccgccgcgttgtcgcagcggcgcccgtctgc 769

                                                                        
Query: 601  gtaggaggtgccgcgtgccttcggaaccctgatgcaactgagaatagggagctggcgggg 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770  gtaggaggtgccgcgtgccttcggaaccctgatgcaactgagaatagggagctggcgggg 829

                                                                        
Query: 661  ctggcgcagcttgatgccactgccaagtgcgcctacgtgctgagcaacgatctcggcaca 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830  ctggcgcagcttgatgccactgccaagtgcgcctacgtgctgagcaacgatctcggcaca 889

                                                                        
Query: 721  atcgacagccttgtcgcccgcctccgcgctgcggtggagggcgacaaggctctggttcgg 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890  atcgacagccttgtcgcccgcctccgcgctgcggtggagggcgacaaggctctggttcgg 949

                                                                        
Query: 781  ctgggtttggagagagggagggagaggttcaccgtgcaggaagtactcaagcagctatcc 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950  ctgggtttggagagagggagggagaggttcaccgtgcaggaagtactcaagcagctatcc 1009

                                                                        
Query: 841  aagagccatgggagttttctacagcagcttgaggaccttgaggagcacatatgcctctgc 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 aagagccatgggagttttctacagcagcttgaggaccttgaggagcacatatgcctctgc 1069

                                                                        
Query: 901  ttttacactgttaacaaagcaagatcattcctccttcaagagatatgcaattgtcaaact 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 ttttacactgttaacaaagcaagatcattcctccttcaagagatatgcaattgtcaaact 1129

                     
Query: 961  ctctagttc 969
            |||||||||
Sbjct: 1130 ctctagttc 1138