Miyakogusa Predicted Gene
- Lj0g3v0286759.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0286759.1 Non Chatacterized Hit- tr|I3T1K5|I3T1K5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.37,0,SAR1GTPBP,Small GTPase superfamily, ARF/SAR type;
small_GTP: small GTP-binding protein domain,Small ,CUFF.19137.1
(555 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024449 similar to UniRef100_A9RFQ6 Cluster: Arl8-fami... 1092 0.0
gnl|LJGI|TC59558 similar to UniRef100_Q10QD5 Cluster: Small GTP-... 70 2e-11
gnl|LJGI|GO008396 homologue to UniRef100_A9RFQ6 Cluster: Arl8-fa... 52 4e-06
>gnl|LJGI|GO024449 similar to UniRef100_A9RFQ6 Cluster: Arl8-family small GTPase; n=1;
Physcomitrella patens subsp. patens|Rep: Arl8-family
small GTPase - Physcomitrella patens subsp. patens,
complete
Length = 656
Score = 1092 bits (551), Expect = 0.0
Identities = 554/555 (99%)
Strand = Plus / Plus
Query: 1 atgggtctctgggattccatgctcaactggctccgcagcttgtttttcaaacaggagatg 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 65 atgggtctctgggattccatgctcgactggctccgcagcttgtttttcaaacaggagatg 124
Query: 61 gaactttcccttgtggggcttcagaatgctggcaagacatctcttgtcaattcaattgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gaactttcccttgtggggcttcagaatgctggcaagacatctcttgtcaattcaattgct 184
Query: 121 actgggggttacagtgaggacatgattccaactgttgggttcaacatgcggaaagtgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 actgggggttacagtgaggacatgattccaactgttgggttcaacatgcggaaagtgact 244
Query: 181 aagggaaatgtcaccataaagctttgggaccttggtggacagaggaggttccggacaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aagggaaatgtcaccataaagctttgggaccttggtggacagaggaggttccggacaatg 304
Query: 241 tgggagcgctactgtcgcggcgtctctgctattgtgtatgttgtagatgctgcggataga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgggagcgctactgtcgcggcgtctctgctattgtgtatgttgtagatgctgcggataga 364
Query: 301 gacagcgttccgatatctcgaagtgagttacatgaactcttcacaaaaccctctttgagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gacagcgttccgatatctcgaagtgagttacatgaactcttcacaaaaccctctttgagt 424
Query: 361 gggattcctttgcttgttcttggcaacaaaattgacaagtcagaagctctttccaagcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gggattcctttgcttgttcttggcaacaaaattgacaagtcagaagctctttccaagcaa 484
Query: 421 gcgttggtcgatcagctaggactagagtcgattaaagacagagaggtctgctgctatatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gcgttggtcgatcagctaggactagagtcgattaaagacagagaggtctgctgctatatg 544
Query: 481 atttcatgcaaggattctgtaaacatagatgcggtcattgactggcttatcaaacactca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atttcatgcaaggattctgtaaacatagatgcggtcattgactggcttatcaaacactca 604
Query: 541 acaactgcaaaatga 555
|||||||||||||||
Sbjct: 605 acaactgcaaaatga 619
>gnl|LJGI|TC59558 similar to UniRef100_Q10QD5 Cluster: Small GTP-binding protein
domain containing protein, expressed; n=2; Oryza
sativa|Rep: Small GTP-binding protein domain containing
protein, expressed - Oryza sativa subsp. japonica
(Rice), complete
Length = 1003
Score = 69.9 bits (35), Expect = 2e-11
Identities = 170/215 (79%)
Strand = Plus / Plus
Query: 79 cttcagaatgctggcaagacatctcttgtcaattcaattgctactgggggttacagtgag 138
|||||||||||||| ||||| || ||||| ||| |||||||||| || || || |||
Sbjct: 200 cttcagaatgctggaaagacttcccttgtaaatgttgttgctactggtggatatagcgag 259
Query: 139 gacatgattccaactgttgggttcaacatgcggaaagtgactaagggaaatgtcaccata 198
|| |||||||| ||||| || ||||| ||| ||||||| || || || ||||| || ||
Sbjct: 260 gatatgattcccactgtgggattcaatatgaggaaagtaacaaaaggcaatgttacaatt 319
Query: 199 aagctttgggaccttggtggacagaggaggttccggacaatgtgggagcgctactgtcgc 258
||| | ||||| ||||| || || |||||||| | |||||||| || ||||||||
Sbjct: 320 aagttatgggatcttggagggcaacctaggttccgcagcatgtgggaacgttactgtcgt 379
Query: 259 ggcgtctctgctattgtgtatgttgtagatgctgc 293
| || ||||||||||| |||||||| ||||||||
Sbjct: 380 gcggtttctgctattgtatatgttgttgatgctgc 414
>gnl|LJGI|GO008396 homologue to UniRef100_A9RFQ6 Cluster: Arl8-family small GTPase;
n=1; Physcomitrella patens subsp. patens|Rep:
Arl8-family small GTPase - Physcomitrella patens subsp.
patens, partial (64%)
Length = 448
Score = 52.0 bits (26), Expect = 4e-06
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 79 cttcagaatgctggcaagacatctcttgtcaattcaattgctactgggggttacagtgag 138
|||||||||||||| ||||| || ||||| ||| |||||||||| || || || |||
Sbjct: 173 cttcagaatgctggaaagacttcccttgtaaatgttgttgctactggtggatatagcgag 232
Query: 139 gacatgattccaactgttgggttcaacatgcggaaagt 176
|| |||||||| ||||| || ||||| ||| |||||||
Sbjct: 233 gatatgattcccactgtgggattcaatatgaggaaagt 270