Miyakogusa Predicted Gene

Lj0g3v0286459.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0286459.1 tr|C2CNG7|C2CNG7_CORST Possible non-specific
serine/threonine protein kinase OS=Corynebacterium
stri,41.82,5.2,seg,NULL,CUFF.19110.1
         (402 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67133                                                      327   3e-89
gnl|LJGI|GO009917 similar to UniRef100_Q880W9 Cluster: Peptide A...    56   2e-07

>gnl|LJGI|TC67133 
          Length = 801

 Score =  327 bits (165), Expect = 3e-89
 Identities = 165/165 (100%)
 Strand = Plus / Minus

                                                                       
Query: 164 cccagccgtacccgagccaaagtcactgtcgcgagtttgagcccagatcgagaccactac 223
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cccagccgtacccgagccaaagtcactgtcgcgagtttgagcccagatcgagaccactac 234

                                                                       
Query: 224 accttcatctctttcttctgatgttgggtttgctgagggtggggtgggtttatggattcg 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 accttcatctctttcttctgatgttgggtttgctgagggtggggtgggtttatggattcg 174

                                                        
Query: 284 gtggtggctttgttaaaggcaccacaatcattcaaccatggcctt 328
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gtggtggctttgttaaaggcaccacaatcattcaaccatggcctt 129



 Score =  198 bits (100), Expect = 2e-50
 Identities = 100/100 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaggaagatggttctgccatgtaaacggaccgagacgttgttccctctggttcaatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atgaggaagatggttctgccatgtaaacggaccgagacgttgttccctctggttcaatgg 456

                                                   
Query: 61  ttatgtgggtttcaggatccagttcttgggtcttctctca 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttatgtgggtttcaggatccagttcttgggtcttctctca 416


>gnl|LJGI|GO009917 similar to UniRef100_Q880W9 Cluster: Peptide ABC transporter,
           permease protein; n=1; Pseudomonas syringae pv.
           tomato|Rep: Peptide ABC transporter, permease protein -
           Pseudomonas syringae pv. tomato, partial (5%)
          Length = 611

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 49/55 (89%), Gaps = 2/55 (3%)
 Strand = Plus / Minus

                                                                  
Query: 42  gttccctctggttcaatggttatgtgggtttcaggatccagttcttgggtcttct 96
           |||||||| ||||| ||||||  ||||||||||| ||| ||||||||||||||||
Sbjct: 338 gttccctcaggttccatggtt--gtgggtttcagtatctagttcttgggtcttct 286