Miyakogusa Predicted Gene
- Lj0g3v0286379.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0286379.1 Non Chatacterized Hit- tr|I1Q9I8|I1Q9I8_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,37.74,0.0000000000005,FAMILY NOT NAMED,NULL; no
description,Nucleotide-binding, alpha-beta plait;
seg,NULL,CUFF.19101.1
(597 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61011 similar to UniRef100_Q2HRG6 Cluster: RNA-bindin... 1158 0.0
>gnl|LJGI|TC61011 similar to UniRef100_Q2HRG6 Cluster: RNA-binding region RNP-1; n=1;
Medicago truncatula|Rep: RNA-binding region RNP-1 -
Medicago truncatula (Barrel medic), partial (88%)
Length = 861
Score = 1158 bits (584), Expect = 0.0
Identities = 584/584 (100%)
Strand = Plus / Plus
Query: 1 atgggatcatcagaagaagagtttgctgcatttgaacagaaagttagaaggacagtgtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atgggatcatcagaagaagagtttgctgcatttgaacagaaagttagaaggacagtgtac 337
Query: 61 ttcgacaacctgtcaccacaggttactgaatctgtgatgagaactgctcttgatcagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttcgacaacctgtcaccacaggttactgaatctgtgatgagaactgctcttgatcagttt 397
Query: 121 gcaactgtcaaaagtgtgaagtttattcccaactacctaggaccaagcctgccacagact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gcaactgtcaaaagtgtgaagtttattcccaactacctaggaccaagcctgccacagact 457
Query: 181 gcattggtggaattggattcttccaagaaggtcgaggatattgtaacaatgatagggcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gcattggtggaattggattcttccaagaaggtcgaggatattgtaacaatgatagggcag 517
Query: 241 tatcctttcatgatgtctgggatgccaaggcctgtcagggctcggcctgctgtgatcgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tatcctttcatgatgtctgggatgccaaggcctgtcagggctcggcctgctgtgatcgaa 577
Query: 301 atgtttgatgatcggccagtaaaccctaacagaaaggtggagtatcgttggctggagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 atgtttgatgatcggccagtaaaccctaacagaaaggtggagtatcgttggctggagcct 637
Query: 361 agtgacccagatatggaggtggcaaaacaacttaagaaccttacgcggaaacatgctgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 agtgacccagatatggaggtggcaaaacaacttaagaaccttacgcggaaacatgctgca 697
Query: 421 gaaatagcacacatgcacaagctgcaactacaagaagaagcaaagcttgcggcgcagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gaaatagcacacatgcacaagctgcaactacaagaagaagcaaagcttgcggcgcagcag 757
Query: 481 acagagacgcttaaaatgcatcacaaaaagtttaaaatgatagatggcattatcactgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 acagagacgcttaaaatgcatcacaaaaagtttaaaatgatagatggcattatcactgat 817
Query: 541 acatctgccatccgtttagcacgaaagtataatctgaatgttgg 584
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 acatctgccatccgtttagcacgaaagtataatctgaatgttgg 861