Miyakogusa Predicted Gene
- Lj0g3v0286209.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0286209.1 tr|F2CRQ6|F2CRQ6_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,55.56,1e-16,seg,NULL;
OSMOTIC STRESS POTASSIUM TRANSPORTER,NULL; K_trans,K+ potassium
transporter,gene.g22279.t1.1
(2040 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76537 weakly similar to UniRef100_A7P334 Cluster: Chr... 1550 0.0
gnl|LJGI|TC64146 similar to UniRef100_A7P334 Cluster: Chromosome... 84 4e-15
gnl|LJGI|DC600138 similar to UniRef100_A7P334 Cluster: Chromosom... 58 2e-07
>gnl|LJGI|TC76537 weakly similar to UniRef100_A7P334 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 960
Score = 1550 bits (782), Expect = 0.0
Identities = 799/807 (99%)
Strand = Plus / Plus
Query: 1234 gaaggagggtttcttccgcttgtgtctgcttctgtccttgctgtggcgatgggaacctgg 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gaaggagggtttcttccgcttgtgtctgcttctgtccttgctgtggcgatgggaacctgg 209
Query: 1294 cattatgcgcaaaagaaagcatacatgtatgaagtgaagaaccaggttttcacggagtac 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cattatgcgcaaaagaaagcatacatgtatgaagtgaagaaccaggttttcacggagtac 269
Query: 1354 ttaagacagatggccaatgatcctaatgtaaaccgtgtgccaggaatcggattcgtatac 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttaagacagatggccaatgatcctaatgtaaaccgtgtgccaggaatcggattcgtatac 329
Query: 1414 tctgagcttgtccagggacttcctcctatgttcccacacttgattgccaacctgccctgc 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tctgagcttgtccagggacttcctcctatgttcccacacttgattgccaacctgccctgc 389
Query: 1474 atccattctgttgttgtgtttgtatctttcaagacaaatcatgttagcagtgttgcaatg 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 atccattctgttgttgtgtttgtatctttcaagacaaatcatgttagcagtgttgcaatg 449
Query: 1534 gaagagaggtttctgtttcagcagctggagccgaaagaatatagaatctttcactgtgtt 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gaagagaggtttctgtttcagcagctggagccgaaagaatatagaatctttcactgtgtt 509
Query: 1594 gtgagtcttggctacacagatgttcttaatgatgctgtggagtttgagtccctcctagtg 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gtgagtcttggctacacagatgttcttaatgatgctgtggagtttgagtccctcctagtg 569
Query: 1654 cagcagcttaaatannnnnnnatacaagaaaaccttttgcttgaggaaacaacaacagca 1713
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cagcagcttaaatatttttttatacaagaaaaccttttgcttgaggaaacaacaacagca 629
Query: 1714 acagaacaagtacctactcctcctactactagtgagagcgaaatagaagaaatcacagat 1773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 acagaacaagtacctactcctcctactactagtgagagcgaaatagaagaaatcacagat 689
Query: 1774 caaggttctcttgttgtgtctccttcttcttcttgctgcattcaatctgagaaggagatc 1833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 caaggttctcttgttgtgtctccttcttcttcttgctgcattcaatctgagaaggagatc 749
Query: 1834 aaatttatagaggaggaaatggagaagggtgtggtgcatctgctaggggaggcagatata 1893
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 750 aaatttatagaggaggaaatggagaagggtgtggtgcgtctgctaggggaggcagatata 809
Query: 1894 attgcagatccaaaatcatctatcttcaataagatagttgtaaattatgcttacaggttc 1953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 attgcagatccaaaatcatctatcttcaataagatagttgtaaattatgcttacaggttc 869
Query: 1954 ttgagaaagaactttaggcaaagggatcaattggtggaaatccctagcaggagactgctc 2013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ttgagaaagaactttaggcaaagggatcaattggtggaaatccctagcaggagactgctc 929
Query: 2014 aagctgggagtaacatatgaaatatga 2040
|||||||||||||||||||||||||||
Sbjct: 930 aagctgggagtaacatatgaaatatga 956
>gnl|LJGI|TC64146 similar to UniRef100_A7P334 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (18%)
Length = 969
Score = 83.8 bits (42), Expect = 4e-15
Identities = 111/134 (82%)
Strand = Plus / Plus
Query: 1834 aaatttatagaggaggaaatggagaagggtgtggtgcatctgctaggggaggcagatata 1893
|||||||||||| | | ||||||||||||||| || || |||||||||| ||||| ||
Sbjct: 465 aaatttatagagaaagcaatggagaagggtgtcgtttatatgctaggggaagcagaggta 524
Query: 1894 attgcagatccaaaatcatctatcttcaataagatagttgtaaattatgcttacaggttc 1953
| || |||||||||| || ||||| |||||||||||||| || |||||||| || |||
Sbjct: 525 gtggctcatccaaaatcctccatcttgaataagatagttgtcaactatgcttatagcttc 584
Query: 1954 ttgagaaagaactt 1967
||| | ||||||||
Sbjct: 585 ttgcggaagaactt 598
>gnl|LJGI|DC600138 similar to UniRef100_A7P334 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 564
Score = 58.0 bits (29), Expect = 2e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 334 aatgataatggcaatggtggatcatttgcactctattcactgatatgtaggca 386
|||||||| ||||| |||||| | |||||||| |||||| |||||||||||||
Sbjct: 433 aatgataacggcaacggtggagcttttgcactgtattcattgatatgtaggca 485