Miyakogusa Predicted Gene
- Lj0g3v0285979.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0285979.2 tr|A8C978|A8C978_MEDTR Sieve element occlusion by
forisomes 1 OS=Medicago truncatula GN=SEO-F1 PE=2
,76.45,0,coiled-coil,NULL,CUFF.19125.2
(1947 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036685 similar to UniRef100_A8C978 Cluster: Forisome;... 805 0.0
gnl|LJGI|TC61635 similar to UniRef100_A8C977 Cluster: Forisome; ... 184 1e-45
gnl|LJGI|FS333807 similar to UniRef100_A8C977 Cluster: Forisome;... 80 6e-14
>gnl|LJGI|GO036685 similar to UniRef100_A8C978 Cluster: Forisome; n=1; Medicago
truncatula|Rep: Forisome - Medicago truncatula (Barrel
medic), partial (19%)
Length = 468
Score = 805 bits (406), Expect = 0.0
Identities = 409/410 (99%)
Strand = Plus / Plus
Query: 1 atgtcacagtccaaaccagctaagctcccaaacccgtttgatctcagtgactctcagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 59 atgtcacagtccaaaccagctaagctcccaaacccgtttgatctcagtggctctcagatt 118
Query: 61 ctggacaaagtttatctgacccacctccatgacgatgacaagtgtgacaaagacatcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ctggacaaagtttatctgacccacctccatgacgatgacaagtgtgacaaagacatcctt 178
Query: 121 ttgaacattgtgtccaatgttatattgaagacaaggttcgcagaaagcagagctgctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ttgaacattgtgtccaatgttatattgaagacaaggttcgcagaaagcagagctgctgtg 238
Query: 181 accagtttccatccagagtttcgtgtactcaagctgatttcttgtcagatgataaacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 accagtttccatccagagtttcgtgtactcaagctgatttcttgtcagatgataaacaca 298
Query: 241 cctcgtggtgaacatcatgtgcaccaaacaacaatgtggattctccaacacctgaaaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cctcgtggtgaacatcatgtgcaccaaacaacaatgtggattctccaacacctgaaaacc 358
Query: 301 tactcatgggatgcaaaaattcttgtcactctagctgctttcactctggaatatgggaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tactcatgggatgcaaaaattcttgtcactctagctgctttcactctggaatatgggaat 418
Query: 361 cttttgtacctcattcaaactccaacatcagatccacttgtgaactcact 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cttttgtacctcattcaaactccaacatcagatccacttgtgaactcact 468
>gnl|LJGI|TC61635 similar to UniRef100_A8C977 Cluster: Forisome; n=1; Vicia faba|Rep:
Forisome - Vicia faba (Broad bean), partial (42%)
Length = 1131
Score = 184 bits (93), Expect = 1e-45
Identities = 600/769 (78%)
Strand = Plus / Plus
Query: 1158 gggtaagcctattgtcccagtgctcaaccctcaaggagacagcatgaatgaagatgcaat 1217
|||||| |||||| ||||||| |||||||||||||| | |||||| |||| ||
Sbjct: 134 gggtaatcctattaccccagtgttcaaccctcaaggaatgttgacgaatgacaatgccat 193
Query: 1218 ggacttgattttccaatgggggatcgatgctttccctttcaggaaaagtgatggttatga 1277
||||||||||||||| ||||| || ||||| |||||||| ||||| ||||||||| |||
Sbjct: 194 ggacttgattttccagtggggaatagatgcattcccttttaggaagagtgatggtattga 253
Query: 1278 tcttactctcaaatggaagtggttctgggatgtcacaaggaaagtaaatcttggaataga 1337
||||||||| || ||||||||| | ||||| | | || |||| || || |||| || |
Sbjct: 254 tcttactctaaagtggaagtggctttgggacataataaaaaaagcaactcctggactaca 313
Query: 1338 ggtcaaaggggacaggtacatcttcatctatggaggtgctgacaaaaaatgggttcaaga 1397
|| ||||| |||||| ||||||||||||| |||| | | || | || ||| | |||||
Sbjct: 314 ggccaaagtggacagatacatcttcatctttggaagcaccaacgataagtggatccaaga 373
Query: 1398 cttcacaatggcagtggagaaaacaaaaaggcatgaaactgtcttgagagcagatgttat 1457
||||||||| | | |||| || |||||| |||| || ||| | | |||||||||||
Sbjct: 374 cttcacaattgaactggacaagctcaaaaggaatgagacggtcaagcgtgcagatgttat 433
Query: 1458 gatagagcactaccatttaggaaaagatgagcctaagattgttcctcgtttctggattga 1517
|||||||| || || | || || ||||| ||||| ||||||| | |||||||| |
Sbjct: 434 aatagagcaatatcagctgggcaaggatgaccctaaccgtgttcctagcttctggatggg 493
Query: 1518 aatagaaagcaagagactgaagaagcaccaccaggatcccctagactgtgagattcaaga 1577
| ||||| |||| | ||| ||| | || || || | | |||||||||||||| |
Sbjct: 494 tgtggaaaggaagaagcagaacaagaagcatcaagaggcagtggactgtgagattcaggg 553
Query: 1578 cattgtcaagagcctgctctgcctcaaacaggatccacaaggatgggctattctcaccaa 1637
||||| |||||| || ||||||||||| |||||| |||||||||| ||||||| |||
Sbjct: 554 gattgtgaagagcttgttctgcctcaaaagggatccccaaggatgggtcattctcagcaa 613
Query: 1638 aggctacaacgtaaagcttctaggtcatggtgagcctatgtatgaaactcttaaggatct 1697
|||| | ||| | |||||||| |||||||| ||| || | ||| ||||| | ||| |
Sbjct: 614 aggccataacatcaagcttctcggtcatggcgaggctgtttatcaaactgtggtggagtt 673
Query: 1698 tgagatatggaaagacaaagtgcttcagaaagaaggctttgacattgccttcaaggaata 1757
| || ||||| || |||||||| ||| |||||| ||||||||||||||||| || ||
Sbjct: 674 tccgaattggaaggagaaagtgctcgagagagaagggtttgacattgccttcaaagagta 733
Query: 1758 ctatgacactaagcttaaggacatgattgctcgtcaaccatgtgagtttctcaatgttgg 1817
|||||||| ||| || || || |||||| |||||||||||| || |||||||||
Sbjct: 734 ctatgacatcaaggccaaagagatctctgctcgccaaccatgtgagattatcaatgttga 793
Query: 1818 taatgaaaatgcaaatgttatagcaaccataacatgcccaaatcccacgtgtgggcgtgt 1877
|| | | ||| ||||| ||||| |||||||||||||||||||| | |||||| |||||
Sbjct: 794 tagctatagtgctaatgtcatagctaccataacatgcccaaatcctatgtgtggccgtgt 853
Query: 1878 gatggatgtgacatctgttcattacaagtgctgccataatgatgctcca 1926
|||||| ||||| |||||| |||||||||||||||| | ||||||||||
Sbjct: 854 gatggaggtgacttctgttaattacaagtgctgccacagtgatgctcca 902
>gnl|LJGI|FS333807 similar to UniRef100_A8C977 Cluster: Forisome; n=1; Vicia faba|Rep:
Forisome - Vicia faba (Broad bean), partial (30%)
Length = 765
Score = 79.8 bits (40), Expect = 6e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 259 gtgcaccaaacaacaatgtggattctccaacacctgaaaacctactcatgggatgcaaaa 318
|||||||||||||||||||||||||| ||| |||||| || |||||| ||||||||||||
Sbjct: 358 gtgcaccaaacaacaatgtggattcttcaaaacctgagaagctactcctgggatgcaaaa 417
Score = 71.9 bits (36), Expect = 1e-11
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 569 tccctgttcttgtgtactggactattgcttccattgttgctgctaccggcaacctcgtcg 628
|||||||| ||| |||||||| |||||| |||||||||| ||||||||||||| ||||
Sbjct: 674 tccctgttgctgtttactggacaattgctgccattgttgcctctaccggcaaccttgtcg 733
Query: 629 gtgtatcg 636
||||||||
Sbjct: 734 gtgtatcg 741