Miyakogusa Predicted Gene

Lj0g3v0285959.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0285959.1 tr|E2FKJ1|E2FKJ1_MEDTR Sieve element occlusion by
forisomes 2 OS=Medicago truncatula GN=SEO-F2 PE=2
,63.76,0,seg,NULL,CUFF.19131.1
         (2031 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS333807 similar to UniRef100_A8C977 Cluster: Forisome;...    86   1e-15
gnl|LJGI|TC61635 similar to UniRef100_A8C977 Cluster: Forisome; ...    68   2e-10

>gnl|LJGI|FS333807 similar to UniRef100_A8C977 Cluster: Forisome; n=1; Vicia faba|Rep:
           Forisome - Vicia faba (Broad bean), partial (30%)
          Length = 765

 Score = 85.7 bits (43), Expect = 1e-15
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                       
Query: 333 aacaatatggattctccagcagctgagaagcttctcctgggatgcaaaagcactgatagc 392
           |||||| |||||||| ||  | |||||||||| ||||||||||||||||||| | ||| |
Sbjct: 369 aacaatgtggattcttcaaaacctgagaagctactcctgggatgcaaaagcaatcataac 428

                                      
Query: 393 tctagctgctttcactttggaatatgg 419
           ||||||||||||||| ||||| |||||
Sbjct: 429 tctagctgctttcaccttggagtatgg 455


>gnl|LJGI|TC61635 similar to UniRef100_A8C977 Cluster: Forisome; n=1; Vicia faba|Rep:
            Forisome - Vicia faba (Broad bean), partial (42%)
          Length = 1131

 Score = 67.9 bits (34), Expect = 2e-10
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1951 tgtggccgtgtgatggaggttacctctgtcaattacaggtgctgccaccatgatgatcca 2010
            |||||||||||||||||||| || ||||| ||||||| ||||||||||  ||||| ||||
Sbjct: 843  tgtggccgtgtgatggaggtgacttctgttaattacaagtgctgccacagtgatgctcca 902

              
Query: 2011 aa 2012
            ||
Sbjct: 903  aa 904