Miyakogusa Predicted Gene

Lj0g3v0285849.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0285849.1 tr|A5X7X9|A5X7X9_PERAE MADS-box transcription
factor Pe.am.AGL6.2 (Fragment) OS=Persea americana PE=,48.51,4e-19,
,gene.g22234.t1.1
         (306 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70992 weakly similar to UniRef100_O82699 Cluster: MAD...   607   e-173

>gnl|LJGI|TC70992 weakly similar to UniRef100_O82699 Cluster: MADS-box protein; n=1;
           Malus x domestica|Rep: MADS-box protein - Malus
           domestica (Apple) (Malus sylvestris), partial (38%)
          Length = 564

 Score =  607 bits (306), Expect = e-173
 Identities = 306/306 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgattgaacaaatggaagagcttcgcacaagggaacgtcatttaggagacctcaataag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24  atgattgaacaaatggaagagcttcgcacaagggaacgtcatttaggagacctcaataag 83

                                                                       
Query: 61  caacttaaactcaagcttgaatcagagggatataatcccaaagttatggaaaacttgtgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  caacttaaactcaagcttgaatcagagggatataatcccaaagttatggaaaacttgtgg 143

                                                                       
Query: 121 tcctctacttcagctgctggaaccagcaactttccctttcatcctgctcaatccaaccca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tcctctacttcagctgctggaaccagcaactttccctttcatcctgctcaatccaaccca 203

                                                                       
Query: 181 atggattgccaaccagaaccctttctgcaaatagggtaccatcaatatgttcaagctgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atggattgccaaccagaaccctttctgcaaatagggtaccatcaatatgttcaagctgaa 263

                                                                       
Query: 241 tcatctagtattccaaagaacagcatgacttgtgagacaaacttcatgcacggatggatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcatctagtattccaaagaacagcatgacttgtgagacaaacttcatgcacggatggatg 323

                 
Query: 301 ctttga 306
           ||||||
Sbjct: 324 ctttga 329