Miyakogusa Predicted Gene

Lj0g3v0285539.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0285539.1 tr|G7J467|G7J467_MEDTR Serine
hydroxymethyltransferase OS=Medicago truncatula GN=MTR_3g073470 PE=3
S,42.19,0.1, ,CUFF.19048.1
         (190 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62975 similar to UniRef100_Q75HP7 Cluster: Serine hyd...   369   e-102

>gnl|LJGI|TC62975 similar to UniRef100_Q75HP7 Cluster: Serine
           hydroxymethyltransferase; n=1; Oryza sativa Japonica
           Group|Rep: Serine hydroxymethyltransferase - Oryza
           sativa subsp. japonica (Rice), partial (7%)
          Length = 691

 Score =  369 bits (186), Expect = e-102
 Identities = 189/190 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacttcgagaggctggttagaagatgatttcgagacaattgctgattttcattttagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 339 atgacttcgagaggctggttagaagatgatttcgagacaattgctgatttttattttagg 398

                                                                       
Query: 61  atagctcgaatggacatgggaaatcatgtaaagattttcttaggaatgctcagaataatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atagctcgaatggacatgggaaatcatgtaaagattttcttaggaatgctcagaataatg 458

                                                                       
Query: 121 aaaatgttattgagctcagaaatcaagttgagacatttgctaaacccgttcggttttgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aaaatgttattgagctcagaaatcaagttgagacatttgctaaacccgttcggttttgtt 518

                     
Query: 181 cttagctaag 190
           ||||||||||
Sbjct: 519 cttagctaag 528