Miyakogusa Predicted Gene
- Lj0g3v0285439.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0285439.1 Non Chatacterized Hit- tr|I3T4U9|I3T4U9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.17,0,RIBOSOMAL_L34E,Ribosomal protein L34e, conserved site;
60S RIBOSOMAL PROTEIN L34,Ribosomal protein L,CUFF.19105.1
(363 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66834 homologue to UniRef100_Q2HVS3 Cluster: Ribosoma... 577 e-164
gnl|LJGI|TC70780 homologue to UniRef100_Q2HVS3 Cluster: Ribosoma... 315 1e-85
gnl|LJGI|TC61895 homologue to UniRef100_P40590 Cluster: 60S ribo... 252 1e-66
gnl|LJGI|TC66740 homologue to UniRef100_P41098 Cluster: 60S ribo... 184 3e-46
>gnl|LJGI|TC66834 homologue to UniRef100_Q2HVS3 Cluster: Ribosomal protein L34e; n=1;
Medicago truncatula|Rep: Ribosomal protein L34e -
Medicago truncatula (Barrel medic), complete
Length = 638
Score = 577 bits (291), Expect = e-164
Identities = 291/291 (100%)
Strand = Plus / Plus
Query: 1 atggtgcaacgcctcacctatcgcaagcggcacagctatgccaccaaatccaaccagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 atggtgcaacgcctcacctatcgcaagcggcacagctatgccaccaaatccaaccagcac 82
Query: 61 agggtcgtcaaaacccccggtgggaagctcgtttaccagaccaccaagaagagggccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 agggtcgtcaaaacccccggtgggaagctcgtttaccagaccaccaagaagagggccagt 142
Query: 121 ggacccaagtgccctgtcactggaaagaggattcaggggatcccgcatctgaggcctaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ggacccaagtgccctgtcactggaaagaggattcaggggatcccgcatctgaggcctaca 202
Query: 181 gaatacaagagatcaaggttacccagaaataggaggactgtgaaccgtgcatatggtggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaatacaagagatcaaggttacccagaaataggaggactgtgaaccgtgcatatggtggt 262
Query: 241 gttttatctggaggagctgttagagaaagaatcattcgagctttcttggtt 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gttttatctggaggagctgttagagaaagaatcattcgagctttcttggtt 313
>gnl|LJGI|TC70780 homologue to UniRef100_Q2HVS3 Cluster: Ribosomal protein L34e; n=1;
Medicago truncatula|Rep: Ribosomal protein L34e -
Medicago truncatula (Barrel medic), complete
Length = 678
Score = 315 bits (159), Expect = 1e-85
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 1 atggtgcaacgcctcacctatcgcaagcggcacagctatgccaccaaatccaaccagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 atggtgcaacgcctcacctatcgcaagcggcacagctatgccaccaaatccaaccagcac 93
Query: 61 agggtcgtcaaaacccccggtgggaagctcgtttaccagaccaccaagaagagggccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 agggtcgtcaaaacccccggtgggaagctcgtttaccagaccaccaagaagagggccagt 153
Query: 121 ggacccaagtgccctgtcactggaaagaggattcagggg 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 154 ggacccaagtgccctgtcactggaaagaggattcagggg 192
Score = 248 bits (125), Expect = 2e-65
Identities = 131/133 (98%)
Strand = Plus / Plus
Query: 159 gatcccgcatctgaggcctacagaatacaagagatcaaggttacccagaaataggaggac 218
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 277 gatcccgcatctgaggcctacagaatacaagaggtcaaggttacccagaaataggaggac 336
Query: 219 tgtgaaccgtgcatatggtggtgttttatctggaggagctgttagagaaagaatcattcg 278
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 337 tgtgaaccgtgcatatggtggtattttatctggaggagctgttagagaaagaatcattcg 396
Query: 279 agctttcttggtt 291
|||||||||||||
Sbjct: 397 agctttcttggtt 409
>gnl|LJGI|TC61895 homologue to UniRef100_P40590 Cluster: 60S ribosomal protein L34;
n=1; Pisum sativum|Rep: 60S ribosomal protein L34 -
Pisum sativum (Garden pea), complete
Length = 719
Score = 252 bits (127), Expect = 1e-66
Identities = 250/291 (85%)
Strand = Plus / Plus
Query: 1 atggtgcaacgcctcacctatcgcaagcggcacagctatgccaccaaatccaaccagcac 60
|||||||| || |||||||| |||| ||| |||||||| || ||||||||||||||||||
Sbjct: 56 atggtgcagcgtctcacctaccgcaggcgtcacagctacgctaccaaatccaaccagcac 115
Query: 61 agggtcgtcaaaacccccggtgggaagctcgtttaccagaccaccaagaagagggccagt 120
| || ||||| |||||||||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 116 cgtgttgtcaagacccccggtgggaaactcgtttatcagaccactaagaagagggccagt 175
Query: 121 ggacccaagtgccctgtcactggaaagaggattcaggggatcccgcatctgaggcctaca 180
|||||||| |||||||| ||||| ||||||||||| ||||| || || ||||||||||
Sbjct: 176 ggacccaaatgccctgttactggcaagaggattcaagggattccacacttgaggcctact 235
Query: 181 gaatacaagagatcaaggttacccagaaataggaggactgtgaaccgtgcatatggtggt 240
|| ||||| ||||| ||||| ||||||| | |||||||||||||| |||||||| ||
Sbjct: 236 gagtacaaaagatccaggttgtccagaaaccgtaggactgtgaaccgagcatatggcgga 295
Query: 241 gttttatctggaggagctgttagagaaagaatcattcgagctttcttggtt 291
|||||||| ||||| ||||| || ||||| || ||||| ||||||||||||
Sbjct: 296 gttttatccggaggtgctgtcagggaaaggattattcgggctttcttggtt 346
>gnl|LJGI|TC66740 homologue to UniRef100_P41098 Cluster: 60S ribosomal protein L34;
n=1; Nicotiana tabacum|Rep: 60S ribosomal protein L34 -
Nicotiana tabacum (Common tobacco), complete
Length = 658
Score = 184 bits (93), Expect = 3e-46
Identities = 216/257 (84%)
Strand = Plus / Plus
Query: 13 ctcacctatcgcaagcggcacagctatgccaccaaatccaaccagcacagggtcgtcaaa 72
||||| ||||||| || ||| ||||||||||||| |||||||||||| | || || ||
Sbjct: 57 ctcacgtatcgcagacgccacggctatgccaccaagtccaaccagcaccgtgttgtgaag 116
Query: 73 acccccggtgggaagctcgtttaccagaccaccaagaagagggccagtggacccaagtgc 132
||||| ||||| ||| | || ||||||||||| |||||||| || || ||||||||||||
Sbjct: 117 acccctggtggcaagttggtgtaccagaccactaagaagagagcaagcggacccaagtgc 176
Query: 133 cctgtcactggaaagaggattcaggggatcccgcatctgaggcctacagaatacaagaga 192
||||| ||||| |||||||| || ||||| || ||| |||| ||||| |||||||||||
Sbjct: 177 cctgttactggcaagaggatccaagggattccacatttgagacctactgaatacaagagg 236
Query: 193 tcaaggttacccagaaataggaggactgtgaaccgtgcatatggtggtgttttatctgga 252
|| ||||| | || || | |||||||||||||| |||||||||||||| ||||| |||
Sbjct: 237 tctaggttgtctaggaaccgcaggactgtgaaccgagcatatggtggtgtattatcagga 296
Query: 253 ggagctgttagagaaag 269
|||||||||||||||||
Sbjct: 297 ggagctgttagagaaag 313