Miyakogusa Predicted Gene
- Lj0g3v0283999.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0283999.1 Non Chatacterized Hit- tr|K3YQF5|K3YQF5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016498,28.05,3e-18,seg,NULL,CUFF.18928.1
(1863 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO013223 similar to UniRef100_A7NV64 Cluster: Chromosom... 1007 0.0
gnl|LJGI|TC66007 similar to UniRef100_A7NV64 Cluster: Chromosome... 868 0.0
gnl|LJGI|TC69738 76 9e-13
>gnl|LJGI|GO013223 similar to UniRef100_A7NV64 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 624
Score = 1007 bits (508), Expect = 0.0
Identities = 521/524 (99%), Gaps = 1/524 (0%)
Strand = Plus / Plus
Query: 1340 cttctcaagtgcagagccgaaatgatttcttcaatctcattaagaagaaaacgttgatga 1399
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 cttctcaagtgcagagccgaaatgatt-cttcaatctcattaagaagaaaacgttgatga 59
Query: 1400 actcctctgcagttcttccagaatctggcccaacggtttcctcaccctcattggagaaat 1459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 actcctctgcagttcttccagaatctggcccaacggtttcctcaccctcattggagaaat 119
Query: 1460 ctggtgaagtaaatatggaaatagttagcccttctgcaagtcttgaatctcttggaaatg 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctggtgaagtaaatatggaaatagttagcccttctgcaagtcttgaatctcttggaaatg 179
Query: 1520 gtgctgaactgactagcaatggcaatgcccatgaagcgctttgcagaacttctgataatg 1579
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gtgctgaactgactagcaatgacaatgcccatgaagcgctttgcagaacttctgataatg 239
Query: 1580 aaggaaaagattcagttctctctgctactatatatccagatgaggaggaagctgcatttc 1639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aaggaaaagattcagttctctctgctactatatatccagatgaggaggaagctgcatttc 299
Query: 1640 ttcgttctcttggctgggaggaaaattcagatgaggatgaaggtcttacagaagaggaga 1699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttcgttctcttggctgggaggaaaattcagatgaggatgaaggtcttacagaagaggaga 359
Query: 1700 tcaatgccttctatcaggagtgtaagaatttggatccttccacattcaaactaagtcagg 1759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tcaatgccttctatcaggagtgtaagaatttggatccttccacattcaaactaagtcagg 419
Query: 1760 gtatgcagccaaagctgtccaagttgttcgaatcttatgcatctaacctgcgcggagctt 1819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gtatgcagccaaagctgtccaagttgttcgaatcttatgcatctaacctgcgcggagctt 479
Query: 1820 ctgctgaattgagttcttctggtcccagatctgatgcttgatgt 1863
||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 480 ctgctgaattgagttcttccggtcccagatctgatgcttgatgt 523
>gnl|LJGI|TC66007 similar to UniRef100_A7NV64 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 691
Score = 868 bits (438), Expect = 0.0
Identities = 438/438 (100%)
Strand = Plus / Plus
Query: 1426 ggcccaacggtttcctcaccctcattggagaaatctggtgaagtaaatatggaaatagtt 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggcccaacggtttcctcaccctcattggagaaatctggtgaagtaaatatggaaatagtt 61
Query: 1486 agcccttctgcaagtcttgaatctcttggaaatggtgctgaactgactagcaatggcaat 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agcccttctgcaagtcttgaatctcttggaaatggtgctgaactgactagcaatggcaat 121
Query: 1546 gcccatgaagcgctttgcagaacttctgataatgaaggaaaagattcagttctctctgct 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcccatgaagcgctttgcagaacttctgataatgaaggaaaagattcagttctctctgct 181
Query: 1606 actatatatccagatgaggaggaagctgcatttcttcgttctcttggctgggaggaaaat 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 actatatatccagatgaggaggaagctgcatttcttcgttctcttggctgggaggaaaat 241
Query: 1666 tcagatgaggatgaaggtcttacagaagaggagatcaatgccttctatcaggagtgtaag 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcagatgaggatgaaggtcttacagaagaggagatcaatgccttctatcaggagtgtaag 301
Query: 1726 aatttggatccttccacattcaaactaagtcagggtatgcagccaaagctgtccaagttg 1785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aatttggatccttccacattcaaactaagtcagggtatgcagccaaagctgtccaagttg 361
Query: 1786 ttcgaatcttatgcatctaacctgcgcggagcttctgctgaattgagttcttctggtccc 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttcgaatcttatgcatctaacctgcgcggagcttctgctgaattgagttcttctggtccc 421
Query: 1846 agatctgatgcttgatgt 1863
||||||||||||||||||
Sbjct: 422 agatctgatgcttgatgt 439
>gnl|LJGI|TC69738
Length = 555
Score = 75.8 bits (38), Expect = 9e-13
Identities = 138/170 (81%), Gaps = 1/170 (0%)
Strand = Plus / Plus
Query: 1684 cttacagaagaggagatcaatgccttctatcaggagtgtaagaatttggatccttccaca 1743
||||||||||||||||| |||||||||||||||||||| | ||| ||| | | |||
Sbjct: 1 cttacagaagaggagat-aatgccttctatcaggagtgcatgaagctgggcacaactaca 59
Query: 1744 ttcaaactaagtcagggtatgcagccaaagctgtccaagttgttcgaatcttatgcatct 1803
|| || ||| ||||||| |||||||| ||| |||||| || || ||||||||||| ||
Sbjct: 60 ttaaagctatgtcagggaatgcagcccaagttgtccacattttttgaatcttatgccact 119
Query: 1804 aacctgcgcggagcttctgctgaattgagttcttctggtcccagatctga 1853
||| ||| |||||| |||||||| ||||||||||| ||||||||||
Sbjct: 120 aacttgcatggagctcctgctgaaacgagttcttctgactccagatctga 169