Miyakogusa Predicted Gene
- Lj0g3v0283989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0283989.1 tr|A9S173|A9S173_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_162224,47.5,0.00000000000003,seg,NULL; FBOX,F-box
domain, cyclin-like,CUFF.18922.1
(552 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV423113 similar to UniRef100_A7R3P7 Cluster: Chromosom... 551 e-156
gnl|LJGI|TC78917 similar to UniRef100_A7R3P7 Cluster: Chromosome... 281 2e-75
>gnl|LJGI|AV423113 similar to UniRef100_A7R3P7 Cluster: Chromosome undetermined
scaffold_553, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_553,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (9%)
Length = 392
Score = 551 bits (278), Expect = e-156
Identities = 305/311 (98%), Gaps = 6/311 (1%)
Strand = Plus / Plus
Query: 1 atggggaaggtttcaccgaaggagaa-gag--ttggaaggggaagaaagggaggaagcaa 57
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 82 atggggaaggtttcaccgaaggagaaagagntttggaaggggaagaaagggaggaagcaa 141
Query: 58 ttgcgaagctccaagaataagtatctcaagcctgggactctcgctcagcttcggtgtaac 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ttgcgaagctccaagaataagtatctcaagcctgggactctcgctcagcttcggtgtaac 201
Query: 118 agatcttcaggttcgggtggcggtaaggcttgcaccgatctcgggaagaagagagtggcg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 agatcttcaggttcgggtggcggtaaggcttgcaccgatctcgggaagaagagagtggcg 261
Query: 178 gttggtttgaattcgagggagacggtggagaagagtcctgtgatgctgt---cgccggtg 234
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 262 gttggtttgaattcgagggagacggtggagaagagtcctgtgatgctgtnnncgccggtg 321
Query: 235 aatttggttaggcagaatagtttgcttgggactcccaaaacgccgagaatcgaagagcct 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aatttggttaggcagaatagtttgcttgggactcccaaaacgccgagaatcgaagagcct 381
Query: 295 caatcggattc 305
|||||||||||
Sbjct: 382 caatcggattc 392
>gnl|LJGI|TC78917 similar to UniRef100_A7R3P7 Cluster: Chromosome undetermined
scaffold_553, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_553,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (55%)
Length = 672
Score = 281 bits (142), Expect = 2e-75
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 325 atggatgttttggttaaactgctatgccacctgcaccatgaccagctgaaggctgtcttc 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggatgttttggttaaactgctatgccacctgcaccatgaccagctgaaggctgtcttc 60
Query: 385 catgtttcacgaagaattagaaaagcagttattgtggcaaggcaatttcacttcaattat 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgtttcacgaagaattagaaaagcagttattgtggcaaggcaatttcacttcaattat 120
Query: 445 actaccccagatcgctctcggc 466
||||||||||||||||||||||
Sbjct: 121 actaccccagatcgctctcggc 142
Score = 113 bits (57), Expect = 1e-24
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 496 ctcccaggcctaatgatcattggcctttcctgtgcaagggtgatgggaagggagtga 552
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ctcccaggcctaatgatcattggcctttcctgtgcaagggtgatgggaagggagtga 220