Miyakogusa Predicted Gene

Lj0g3v0283799.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0283799.1 Non Chatacterized Hit- tr|I1MJX4|I1MJX4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,71.36,0,SIGMA54_INTERACT_1,Sigma-54 interaction domain,
ATP-binding site 1; ATPases associated with a variet,CUFF.18944.1
         (8619 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS337473 weakly similar to UniRef100_A7P6L7 Cluster: Ch...   561   e-158

>gnl|LJGI|FS337473 weakly similar to UniRef100_A7P6L7 Cluster: Chromosome chr9
           scaffold_7, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 596

 Score =  561 bits (283), Expect = e-158
 Identities = 283/283 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgattgacggcagtttcagtatagagtcttcgcttcggcgatttctcgatcgttgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atggcgattgacggcagtttcagtatagagtcttcgcttcggcgatttctcgatcgttgc 373

                                                                       
Query: 61  cccgagcttcaacctaagttcggttcgctagcagagaagggaagcttggttactgaggag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cccgagcttcaacctaagttcggttcgctagcagagaagggaagcttggttactgaggag 433

                                                                       
Query: 121 gaagtagttgattcgttagtgagggtgtttctgcatcctagatatacaattccattgatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gaagtagttgattcgttagtgagggtgtttctgcatcctagatatacaattccattgatt 493

                                                                       
Query: 181 ggatgtttccgtccaattgctcggaattttgtcgacaaagctgttgctttgcttcgtctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggatgtttccgtccaattgctcggaattttgtcgacaaagctgttgctttgcttcgtctg 553

                                                      
Query: 241 gtgaagaatttgaggtctgatactgagggcaccgccatggaaa 283
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gtgaagaatttgaggtctgatactgagggcaccgccatggaaa 596